arq5x poretools issues - Githubissues

arq5x / poretools

a toolkit for working with Oxford nanopore data

MIT License

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issues

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Recursive search in windows version? (0.5.1)

#142 caonetto opened 7 years ago
0
not retrieving data from skip folder

#141 jordur closed 7 years ago
1
SyntaxError: Missing parentheses in call to 'print' on line 6 of setup.py

#140 methylnick opened 7 years ago
0
Extend stats, qualdist, --min-length functionality, etc. to fastq?

#139 osilander opened 7 years ago
2
0.6.0: AttributeError: 'Fast5File' object has no attribute 'read_metadata'

#138 mmokrejs opened 7 years ago
3
0.6.0: TypeError: int() argument must be a string or a number, not 'NoneType'

#137 mmokrejs opened 7 years ago
1
Please include LICENSE file in top-level directory and add GPL version to setup.py

#136 mmokrejs closed 6 years ago
1
Fast5 zip

#135 robegan21 opened 7 years ago
0
poretools 0.6.0 vs 0.6.0

#134 Dramenia opened 7 years ago
0
Increase in read number from fast5 to fastq

#133 emilyjunkins opened 7 years ago
1
Poretools yield plot function not working

#132 NathanielLegall opened 7 years ago
0
ImportError: No module named ipykernel.pylab.backend_inline

#131 alec-djinn opened 7 years ago
0
About occupancy

#130 wososa opened 7 years ago
1
minor changes to make compatible with python3 install

#129 robegan21 opened 7 years ago
0
Module not found

#128 CANRwisser17 opened 7 years ago
0
Poretools not finding start times for 1D data

#127 aminards opened 7 years ago
6
Issue running poretools on Mac

#126 NathanielLegall opened 7 years ago
0
Extract trimmed Fastq from demultiplexed fast5 file

#125 mmanno opened 7 years ago
0
poretools occupancy - unable to find start times

#124 webbchen opened 7 years ago
1
typo in the readme

#123 roblanf opened 7 years ago
0
creating pdfs on a server with ssh

#122 roblanf opened 7 years ago
0
poretools not finding fastq after subsequent albacore basecalling

#121 biorover opened 7 years ago
3
Poretools on mac

#120 aodainic opened 7 years ago
1
new ISO format for exp_start_time written by minKNOW

#119 sengelen closed 7 years ago
3
working with multiple folders from Metrichor

#118 jarrodscott opened 7 years ago
11
Poretools qualpos function error

#117 JasperBoom closed 5 years ago
0
Updates to account for new MinKNOW v1.4 subdirectory structure

#116 tomsasani closed 7 years ago
1
Update yield_plot example to work with test_data

#115 bigmug closed 7 years ago
1
No result or error message when using fastq function

#114 GeorgiaBreckell opened 7 years ago
2
add group switch to stats option

#113 awitney closed 7 years ago
1
Installing poretools on RH Linux

#112 entzn opened 7 years ago
0
More explicit instructions for running with Docker

#111 conchoecia opened 7 years ago
0
fast5 content

#110 KeyingLu opened 7 years ago
1
Log errors to stderr not stdout

#109 Phelimb closed 7 years ago
1
Poretools 0.6.0 does not output sequences on Metrichor and Albacore basecalled 'skipped' reads

#108 michieitel opened 7 years ago
2
Poretools 0.6.0 `times` dies on R9.4 albacore based called fast5

#107 Phelimb closed 7 years ago
4
installing poretools on a UNIX server

#106 alohith opened 8 years ago
0
ImportError: No module named 'Fast5File'

#105 CAllex-Buckner opened 8 years ago
1
Update Fast5File.py

#104 eunicekokor opened 8 years ago
0
Local base calling & fast5 attribute/data format

#103 noncodo opened 8 years ago
0
poretools (0.6.0 ) libhdf5.so.6: cannot open shared object file: No such file or directory

#102 Wang-Jing-NZ opened 8 years ago
2
add support for python 3

#101 pfaucon opened 8 years ago
0
python3 support?

#100 pfaucon opened 8 years ago
9
select different basecall_1D_00X sets for fastq/fasta export

#99 steichten closed 8 years ago
1
Trying to get times of reads in fail file

#98 EpiBlake opened 8 years ago
1
[documentation question] what are facets?

#97 cjprybol opened 8 years ago
0
v0.6.0 for windows not released

#96 pancheto opened 8 years ago
2
poretools hist - indexError: list index out of range

#95 falkomathes closed 8 years ago
0
Use the full GPG key ID.

#94 charles-plessy closed 2 years ago
0
poretools: command not found

#93 ShaoyuanTan opened 8 years ago
1

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