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bhklab
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CoreGx
Shared code for both PharmacoGx and RadioGx
https://bhklab.github.io/CoreGx/
GNU General Public License v3.0
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183 improve output of callingwaterfallrl54
#184
jjjermiah
closed
3 months ago
0
Improve output of callingWaterfall.R#L54
#183
bhaibeka
opened
3 months ago
2
Devel
#182
jjjermiah
closed
3 months ago
1
Endoaggregate Error
#181
jjjermiah
opened
3 months ago
0
Devel
#180
jjjermiah
closed
5 months ago
0
Devel
#179
jjjermiah
closed
6 months ago
0
fix bioc error
#178
jjjermiah
closed
6 months ago
0
Update object bioc 3 19 bugfix
#177
gladkia
closed
3 months ago
1
CoreGx installation fails on Bioc 3.19
#176
gladkia
closed
4 months ago
0
version bump and date
#175
jjjermiah
closed
1 year ago
0
added macOS and windows GHA
#174
jjjermiah
closed
1 year ago
0
fixing warnings
#173
jjjermiah
closed
1 year ago
0
fixed generic S3 function error
#172
jjjermiah
closed
1 year ago
0
Devel
#171
jjjermiah
closed
1 year ago
0
added return line that was previously removed
#170
jjjermiah
closed
1 year ago
0
Merging previous Main branch
#169
jjjermiah
closed
1 year ago
0
fix .checkForIdColumn
#168
gabora
closed
1 year ago
1
Fix bug in assays,TreatmentResponseExperiment-method caused by deleting non-existing columns in data.table
#167
ChristopherEeles
closed
1 year ago
0
Handle trailing commas via `...` in `aggregate2` method
#166
ChristopherEeles
opened
1 year ago
0
Removed first positional argument name from .fitCurve to fix downstream bug in RadioGx due to different argument names
#165
ChristopherEeles
closed
1 year ago
0
Parameterized loss function in curve fitting with new function .fitCurve2
#164
ChristopherEeles
closed
1 year ago
0
Autocomplete hook implementation
#163
ChristopherEeles
closed
1 year ago
0
Prepend dots to assay index
#162
ChristopherEeles
closed
1 year ago
0
Prepending dots to internal assay primary key columns
#161
ChristopherEeles
closed
1 year ago
0
Unclear documentation for parameters in subset,LongTable-method
#160
p-smirnov
closed
1 year ago
1
Update Bioconductor version of CoreGx
#159
ChristopherEeles
closed
1 year ago
0
Weird Bug in Printing the LongTable/TRE
#158
p-smirnov
closed
1 year ago
2
Add useful error to show,CoreSet-method to address #156
#157
ChristopherEeles
closed
1 year ago
0
no slot of name error
#156
spocks
closed
1 year ago
7
Bug in `assay<-` method for `LongTable` causing balooning memory usage if an assay contains a subset of row and column keys
#155
ChristopherEeles
closed
2 years ago
2
`aggregate2` method does not respect `nthread` argument if `nthread` > 1
#154
ChristopherEeles
closed
2 years ago
0
`assay<-,LongTable-method` erases all assays in `TRE` when assigning `NULL` to a specified assay slot by integer index.
#153
ff98li
closed
1 year ago
0
`colData<-` produces persistent warnings after reassigning the original column data back to `colData` slot
#152
ff98li
closed
1 year ago
1
assay<-,LongTable,character-method errors when assigning assays with subset of row or column ids
#151
ChristopherEeles
closed
2 years ago
0
development
#150
ChristopherEeles
closed
2 years ago
0
`subset,LongTable-method` corrupts referential integrity of summary assays
#149
ChristopherEeles
closed
2 years ago
2
Subsetting a `TreamentResponseExperiment` corrupts referrential integrity
#148
ChristopherEeles
closed
2 years ago
3
`reindex` method corrupts referential integrity when a summary assay is present
#147
ChristopherEeles
closed
2 years ago
0
Subsetting LongTable by rows only produces unexisting assay observations and key combinations
#146
ff98li
closed
2 years ago
3
decrease curvefit derivative step
#145
ChristopherEeles
closed
2 years ago
0
y to frac needs to be run before truncation
#144
p-smirnov
closed
2 years ago
0
Development
#143
ChristopherEeles
closed
2 years ago
0
Fix bug in show method due to misplaced parenthesis
#142
ChristopherEeles
closed
2 years ago
0
Development
#141
ChristopherEeles
closed
2 years ago
0
Feature slot rename chris
#140
ChristopherEeles
closed
2 years ago
0
Fitcurve opt
#139
p-smirnov
closed
2 years ago
0
LongTableDataMapper show method doesn't display columns which will be renamed
#138
ChristopherEeles
opened
2 years ago
0
Write some unit tests for some curve fitting related functions
#137
p-smirnov
opened
2 years ago
0
Missing rescaling in the .residual function
#136
p-smirnov
closed
2 years ago
0
Fixing a bug in sorting the y values in the same order as x
#135
p-smirnov
closed
2 years ago
1
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