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bluegenes
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MakeMyTranscriptome
assemble, annotate, and assess transcriptomes in a single step
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diamond build db failing
#74
bluegenes
opened
7 years ago
0
Revert "Task update"
#73
bluegenes
closed
7 years ago
0
Task update
#72
bluegenes
closed
7 years ago
0
fix manage_tools logging and fix some bugs around setup tasks
#71
bluegenes
closed
8 years ago
0
Transrate setup task is always skipped
#70
nhartwic
opened
8 years ago
0
make database wiki
#69
bluegenes
opened
8 years ago
0
Manage_tools output
#68
nhartwic
closed
8 years ago
1
cherrypick function changes from working master to add to refactor
#67
bluegenes
closed
8 years ago
0
Working b
#66
bluegenes
closed
8 years ago
0
chmod bug
#65
nhartwic
closed
8 years ago
1
Revert "Db config update"
#64
bluegenes
closed
8 years ago
0
Db config update
#63
bluegenes
closed
8 years ago
0
update to remove history system and add target_name renaming
#62
bluegenes
closed
8 years ago
0
add cleanup option
#61
bluegenes
opened
8 years ago
1
Rcorr
#60
bluegenes
closed
8 years ago
0
Excel fix
#59
bluegenes
closed
8 years ago
0
MMT main script: consolidate file checks, etc
#58
bluegenes
opened
8 years ago
1
Filt dev
#57
bluegenes
closed
8 years ago
0
configurable databases
#56
nhartwic
closed
8 years ago
1
databases
#55
bluegenes
closed
8 years ago
0
wiki writup of Tasks
#54
nhartwic
closed
8 years ago
0
Integrate gff3
#53
bluegenes
closed
8 years ago
0
Integrate report creation
#52
bluegenes
closed
8 years ago
0
Gff3 output + random subset memory fix
#51
bluegenes
closed
8 years ago
0
Gtm dev
#50
bluegenes
closed
8 years ago
0
allow excel for expression DE
#49
bluegenes
closed
8 years ago
0
Assembly report
#48
bluegenes
closed
8 years ago
0
gene-trans map
#47
bluegenes
closed
8 years ago
0
Handle excel or csv
#46
bluegenes
closed
8 years ago
0
supervisor now checks fore/back before printing
#45
bluegenes
closed
8 years ago
1
pre-test
#44
bluegenes
closed
8 years ago
0
Add a Gitter chat badge to README.md
#43
gitter-badger
closed
8 years ago
0
Filter dev
#42
bluegenes
closed
8 years ago
0
Filter dev2
#41
bluegenes
closed
8 years ago
0
fixed kegg to use pandas parsing of annotation table
#40
bluegenes
closed
8 years ago
0
Tasks update
#39
bluegenes
closed
8 years ago
0
Switch from printing warnings to using pythons Warnings class
#38
nhartwic
closed
8 years ago
0
Transrate update
#37
bluegenes
closed
8 years ago
0
update for master/history logs and fix for database log
#36
bluegenes
closed
8 years ago
0
Tools dev2
#35
bluegenes
closed
8 years ago
0
update for tools manager to improve tool checks during run
#34
bluegenes
closed
8 years ago
0
Tools dev
#33
bluegenes
closed
8 years ago
0
update for email support and to fix cpu issues in manage_database.py
#32
bluegenes
closed
8 years ago
0
Parser dev
#31
bluegenes
closed
8 years ago
0
Quality module dev
#30
bluegenes
closed
8 years ago
0
change default expression pipeline
#29
bluegenes
closed
8 years ago
1
cds. handling (diamond /blast compatibility)
#28
bluegenes
closed
8 years ago
0
diamond integration: post-diamond blast processing
#27
bluegenes
closed
8 years ago
2
assembly_scrape
#26
bluegenes
closed
8 years ago
0
manage databases: modifications
#25
bluegenes
closed
8 years ago
0
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