issues
search
bridgedb
/
BridgeDb
The BridgeDb Library source code
https://bridgedb.org/
Apache License 2.0
28
stars
21
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Install latest bridgedb databases in new server
#93
nunogit
closed
5 years ago
1
Metabolite query gives 502 error
#92
DeniseSl22
closed
5 years ago
2
New HMDb IDs are not recognised
#91
DeniseSl22
closed
5 years ago
5
Build org.bridgedb.tools.qc from regular build
#90
DeniseSl22
closed
4 years ago
4
fixing compilation error for Java 11
#89
The-Marvex
closed
5 years ago
1
added support for Java 11
#88
The-Marvex
closed
5 years ago
0
Add IUPHAR ID for mapping purposes in datasources.txt
#87
DeniseSl22
closed
5 years ago
2
BridgeDb tool to create linksets in a Wizard mode for use by biologists
#86
egonw
opened
5 years ago
3
Search in PV with webservice doesn't differentiate between DataNode types
#85
DeniseSl22
opened
5 years ago
0
Link out to GeneWiki
#84
egonw
closed
5 years ago
6
support Compact Identifiers as webservice output
#83
egonw
closed
1 year ago
1
set up advisory board
#80
egonw
closed
5 years ago
6
Does not compile with (Open)JDK 11
#79
egonw
closed
5 years ago
1
set up a SAB
#78
egonw
closed
6 years ago
1
Broken link
#77
ariutta
closed
5 years ago
1
Linkout miBase is not up to date
#76
DeniseSl22
closed
4 years ago
0
New webservice API call - GetWebserviceProperties
#74
JonathanMELIUS
closed
1 year ago
1
check website with list of system codes and make sure DSSTox and other new metabolite data sources are there
#73
egonw
closed
6 years ago
0
Change the default opening page on the library
#71
nunogit
closed
6 years ago
0
Swagger on BridgeDb docker image
#70
marvinm2
closed
5 years ago
4
Re-routing to non-existing url
#69
marvinm2
closed
6 years ago
1
Use extension .tsv so github, etc. can recognize filetype.
#68
ariutta
closed
5 years ago
6
more than one datasource with "urn:miriam:uniprot" is causing trouble
#67
egonw
closed
6 years ago
4
datasources.txt Uniprot identifiers causes IMS to fail
#66
ianwdunlop
closed
6 years ago
5
Avoid returning `null`. Prefer `Optional`
#63
randykerber
opened
6 years ago
1
Tolerate loading empty linkset files into IMS
#62
randykerber
opened
6 years ago
19
linkset paths wrong for ensembl mus musculus
#61
ianwdunlop
closed
6 years ago
1
introduce API for "secondary" identifiers
#59
egonw
closed
4 years ago
8
IMS link set build failing
#58
ariutta
closed
6 years ago
4
OCRS URI patterns+ PICR updates
#57
ianwdunlop
closed
7 years ago
0
Compile fail on Travis due to ClassNotFound
#56
egonw
opened
7 years ago
3
Secondary ID mapping service in Bridge DB
#55
DeniseSl22
opened
7 years ago
3
check matching of new HMDB identifiers
#54
egonw
closed
7 years ago
0
synergizer.jar and orthoxml-0.1b.jar are not open source
#53
stain
opened
7 years ago
2
IDMapperUniprot does not follow relative redirects
#52
stain
closed
7 years ago
0
PubChem Substance needs to be secondary source
#51
egonw
closed
7 years ago
1
Wikidata is primary source
#50
egonw
closed
7 years ago
0
Webservice not working.
#49
KeironO
closed
7 years ago
14
add new data sources to datasources.txt
#47
egonw
closed
7 years ago
0
Fix/45 refseq wp prefix
#46
randykerber
closed
7 years ago
0
idRegexPattern for RefSeq missing "WP" prefix
#45
randykerber
closed
7 years ago
2
Merge ops-2.2 into master.
#44
randykerber
closed
7 years ago
1
Need new hasUriPattern for Uniprot to Ensembl Linkset.
#43
randykerber
closed
7 years ago
7
summarize the total number of identifiers and the total number of mappings
#42
egonw
closed
7 years ago
1
Bump version to -SNAPSHOT
#41
stain
closed
7 years ago
8
Preferred IRIs for Xref properties
#38
ariutta
opened
7 years ago
0
set up ims.bridgedb.org
#37
egonw
opened
7 years ago
7
webservice: `search` vs. `freeSearch` vs. `attributeSearch`
#36
ariutta
closed
7 years ago
2
missing probe identifiers?
#35
egonw
closed
7 years ago
2
Support Taxonomy for organisms?
#34
ariutta
opened
7 years ago
3
Previous
Next