cBioPortal cbioportal-core issues

cBioPortal / cbioportal-core

Externalized cBioPortal Core

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issues

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Support incremental upload for study data

#67 forus opened 1 day ago
1
Add a script to filter mutations in a MAF file

#66 forus opened 3 weeks ago
0
Inconsistent Handling of 5'Flank Mutation Type with Custom Filtered Mutations

#65 forus opened 3 weeks ago
0
Validator update: only allow SOMATIC or GERMLINE values for SV_Status column

#64 oplantalech opened 3 weeks ago
3
Validation Update: Add a warning for GERMLINE variants in MAF and SV files

#63 rmadupuri closed 1 month ago
0
Removing the filtering of amino acid changes with '+' as not relevant anymore

#62 MatthijsPon closed 1 month ago
0
Docker installation - import studies example not working (google group)

#61 n1zea144 opened 1 month ago
1
:hammer: Fix DockerFile to build locally

#60 haynescd opened 1 month ago
0
Clickhouse import process

#59 sheridancbio opened 1 month ago
0
Minor fix to validate floats in clinical files

#58 rmadupuri closed 2 months ago
0
Release v1.0.9

#57 dippindots closed 2 months ago
0
Update Python Lib Requests to 2.32.3

#56 haynescd closed 2 months ago
0
Initialise transactionTemplate if needed

#55 forus closed 4 months ago
1
Remove ImportDrugs class

#54 forus opened 4 months ago
0
Move relevant docs from cbioportal to cbioportal-core

#53 forus opened 4 months ago
1
Build and release executable jar automatically

#52 dippindots opened 4 months ago
0
release v1.0.8

#51 dippindots closed 5 months ago
0
Add release drafter to cbioportal-core

#50 dippindots opened 5 months ago
0
Remove unused the ImportSif code

#49 forus opened 5 months ago
0
RFC79: Incremental Upload of Data Entries

#48 forus closed 4 months ago
2
RFC79: Implement feedback from previous 7 PRs

#47 forus closed 5 months ago
0
RFC84: Data Entries Removal

#46 forus closed 4 months ago
0
(1/7) RFC 79: Implement incremental upload of tab delimited data.

#45 forus closed 5 months ago
0
(2/7) RFC79: Make study_es_0_inc data pass validation

#44 forus closed 5 months ago
0
(3/7) RFC79: Implement incremental upload for timeline data

#43 forus closed 5 months ago
0
(4/7) RFC79: Implement incremental upload of CNA DISCRETE long data

#42 forus closed 5 months ago
0
(5/7) RFC79: Implement incremental upload for gene panel matrix

#41 forus closed 5 months ago
0
(6/7) RFC79: Implement incremental upload of structural variants data

#40 forus closed 5 months ago
0
(7/7) RFC79: Implement incremental upload of CNA segmented data

#39 forus closed 5 months ago
0
Implement incremental upload of tab delimited data.

#38 forus closed 5 months ago
0
Run java integration tests on CI

#37 forus closed 6 months ago
0
Move integration tests from cbioportal to cbioportal-core

#36 forus opened 6 months ago
0
Improve code by making caching behaviour less invasive

#35 forus opened 6 months ago
0
WIP: Incremental data upload for mutations, case lists, patient and sample attributes (version 2)

#34 forus closed 6 months ago
0
https://www.cbioportal.org/webservice.do?cmd=getCancerStudies not working

#33 daianatoader opened 7 months ago
1
Incremental data upload for mutations, case lists, patient and sample attributes

#32 forus closed 6 months ago
1
Remove support of MIXED_ATTRIBUTES datatype of clinical files

#31 forus opened 7 months ago
0
WIP: Incremental data upload POC

#30 forus closed 8 months ago
0
Enable integration tests

#29 forus closed 7 months ago
11
update mysql-connector-java to 8.0.28

#28 sheridancbio closed 7 months ago
4
Change Assert() into Warning for db.user/db.password/...

#27 sheridancbio closed 8 months ago
0
Change Assert() into Warning for db.user/db.password/...

#26 sheridancbio closed 8 months ago
1
Speed up CnaEvent lookup during import

#25 sheridancbio opened 8 months ago
2
Fix core dep issues and cna utils

#24 haynescd closed 8 months ago
1
:bookmark: Update to 1.0.7-SNAPSHOT

#23 haynescd closed 8 months ago
0
:bookmark: Update to 1.0.6 for tag

#22 haynescd closed 8 months ago
0
Update Pom to include requirements.txt in jar

#21 haynescd closed 8 months ago
0
Add JUnit tests

#20 JREastonMarks closed 8 months ago
0
Update cbioportal version

#19 JREastonMarks closed 8 months ago
0
Official Documentation Needs to Be Updated

#18 7xuanlu opened 8 months ago
1