cBioPortal cbioportal-core issues

cBioPortal / cbioportal-core

Externalized cBioPortal Core

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Minor fix to validate floats in clinical files

#58 rmadupuri closed 1 week ago
0
Release v1.0.9

#57 dippindots closed 2 weeks ago
0
Update Python Lib Requests to 2.32.3

#56 haynescd closed 2 weeks ago
0
Initialise transactionTemplate if needed

#55 forus closed 1 month ago
1
Remove ImportDrugs class

#54 forus opened 2 months ago
0
Move relevant docs from cbioportal to cbioportal-core

#53 forus opened 2 months ago
1
Build and release executable jar automatically

#52 dippindots opened 2 months ago
0
release v1.0.8

#51 dippindots closed 2 months ago
0
Add release drafter to cbioportal-core

#50 dippindots opened 2 months ago
0
Remove unused the ImportSif code

#49 forus opened 2 months ago
0
RFC79: Incremental Upload of Data Entries

#48 forus closed 2 months ago
2
RFC79: Implement feedback from previous 7 PRs

#47 forus closed 2 months ago
0
RFC84: Data Entries Removal

#46 forus closed 2 months ago
0
(1/7) RFC 79: Implement incremental upload of tab delimited data.

#45 forus closed 2 months ago
0
(2/7) RFC79: Make study_es_0_inc data pass validation

#44 forus closed 2 months ago
0
(3/7) RFC79: Implement incremental upload for timeline data

#43 forus closed 2 months ago
0
(4/7) RFC79: Implement incremental upload of CNA DISCRETE long data

#42 forus closed 2 months ago
0
(5/7) RFC79: Implement incremental upload for gene panel matrix

#41 forus closed 2 months ago
0
(6/7) RFC79: Implement incremental upload of structural variants data

#40 forus closed 2 months ago
0
(7/7) RFC79: Implement incremental upload of CNA segmented data

#39 forus closed 2 months ago
0
Implement incremental upload of tab delimited data.

#38 forus closed 3 months ago
0
Run java integration tests on CI

#37 forus closed 4 months ago
0
Move integration tests from cbioportal to cbioportal-core

#36 forus opened 4 months ago
0
Improve code by making caching behaviour less invasive

#35 forus opened 4 months ago
0
WIP: Incremental data upload for mutations, case lists, patient and sample attributes (version 2)

#34 forus closed 4 months ago
0
https://www.cbioportal.org/webservice.do?cmd=getCancerStudies not working

#33 daianatoader opened 4 months ago
0
Incremental data upload for mutations, case lists, patient and sample attributes

#32 forus closed 4 months ago
1
Remove support of MIXED_ATTRIBUTES datatype of clinical files

#31 forus opened 5 months ago
0
WIP: Incremental data upload POC

#30 forus closed 5 months ago
0
Enable integration tests

#29 forus closed 5 months ago
11
update mysql-connector-java to 8.0.28

#28 sheridancbio closed 5 months ago
4
Change Assert() into Warning for db.user/db.password/...

#27 sheridancbio closed 6 months ago
0
Change Assert() into Warning for db.user/db.password/...

#26 sheridancbio closed 6 months ago
1
Speed up CnaEvent lookup during import

#25 sheridancbio opened 6 months ago
2
Fix core dep issues and cna utils

#24 haynescd closed 6 months ago
1
:bookmark: Update to 1.0.7-SNAPSHOT

#23 haynescd closed 6 months ago
0
:bookmark: Update to 1.0.6 for tag

#22 haynescd closed 6 months ago
0
Update Pom to include requirements.txt in jar

#21 haynescd closed 6 months ago
0
Add JUnit tests

#20 JREastonMarks closed 6 months ago
0
Update cbioportal version

#19 JREastonMarks closed 6 months ago
0
Official Documentation Needs to Be Updated

#18 7xuanlu opened 6 months ago
1
Add requirements.txt

#17 JREastonMarks closed 6 months ago
0
Dockerise

#16 forus closed 5 months ago
5
Java tests are not picked up when using maven 3.9.5

#15 forus opened 6 months ago
2
filter out signature files from bc dependency

#14 sheridancbio closed 6 months ago
0
Add java_opts to cbioportalImporter.py

#13 oplantalech closed 5 months ago
2
Invalid signature exception while executing cbioportal-core jar

#12 forus closed 6 months ago
4
Update CnaUtil.java

#11 JREastonMarks closed 7 months ago
0
Ignore gene described in the CNA Discrete Long file if it cannot be found in the database

#10 oplantalech closed 7 months ago
0
update cbioportal to v6.0.0 release

#9 sheridancbio closed 7 months ago
1