cancerDHC ccdhmodel issues

cancerDHC / ccdhmodel

CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)

https://cancerdhc.github.io/ccdhmodel/

BSD 3-Clause "New" or "Revised" License

16 stars 8 forks source link

issues

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Set v1.2 as the "latest" release on the documentation website

#169 gaurav opened 2 years ago
0
tox should use $(RUN) wrapper not pipenv

#168 turbomam closed 2 years ago
0
Added a custom markdowngen.py that we need to build our documentation

#167 gaurav closed 2 years ago
0
Add support for code coverage testing

#166 gaurav opened 2 years ago
0
Add code style checking with Black

#165 gaurav opened 2 years ago
0
Remove references to `./vendor/sheet2linkml` from README

#164 gaurav closed 2 years ago
0
Revise readme.md reflecting changes in sheet2linkml

#163 jooho-lee-kim closed 2 years ago
3
Add schema file in YAML to PyPI package

#162 gaurav opened 2 years ago
1
Secure computing/Authority to Operate responsibilities for this repo?

#160 turbomam opened 2 years ago
0
Determine how enumerations and recommended codes should be handled in the CRDCH model

#159 gaurav opened 2 years ago
2
Add attributes to the CSV file generated as an artifact

#158 gaurav opened 2 years ago
0
Store field transformation information in the CRDCH model

#157 gaurav opened 2 years ago
0
Update LinkML and regenerate model

#156 gaurav opened 2 years ago
0
Get rid of the `ccdh-dev` fork of LinkML

#155 gaurav closed 2 years ago
1
unhashable type: 'CodeableConcept' when loading programmatically created data file

#154 turbomam opened 2 years ago
2
Reflect any mappings currently in Python code in terminology server or model

#161 turbomam opened 2 years ago
3
require that the value going into a Coding's system slot is a URL

#152 turbomam opened 2 years ago
2
How to determine the appropriate system URL for a codable concept

#153 turbomam opened 2 years ago
2
quick update to pipenv installation step

#151 sujaypatil96 closed 2 years ago
0
Align quantities with Biolink and NMDC

#150 wdduncan opened 2 years ago
0
Use biolink Named Thing as root node

#149 wdduncan opened 2 years ago
2
Create observation abstract class

#148 wdduncan opened 2 years ago
5
Implement Git Flow branching model

#147 gaurav opened 2 years ago
0
Figure out why the GitHub Actions are taking so long to run

#146 gaurav opened 2 years ago
0
Add categories for entites (e.g. "administrative entity", "clinical entity")

#145 gaurav opened 2 years ago
0
Add CRDCH Model Entities and Relationships diagram to CRDCH model documentation

#144 gaurav opened 2 years ago
3
move examples for discussion folder to DMH repo

#143 sujaypatil96 opened 2 years ago
2
add github issue templates

#142 sujaypatil96 closed 2 years ago
0
rdflib-jsonld is now deprecated

#141 jooho-lee-kim opened 2 years ago
0
Add CONTRIBUTING.md

#140 jooho-lee-kim closed 2 years ago
2
Update LinkML and test OWL generation

#139 gaurav opened 2 years ago
0
fix importing of `crdch_model` dataclass

#138 sujaypatil96 closed 2 years ago
1
Add Github `ISSUE_TEMPLATE` to `.github` folder to allow for the customization of feature and bug report filing.

#137 gaurav closed 2 years ago
0
Repository contribution guideline

#136 jooho-lee-kim closed 2 years ago
1
Issue 134 authorship

#135 turbomam opened 2 years ago
1
I shouldn't be the author

#134 turbomam opened 2 years ago
4
Be more specific about specific kinds of observation types

#133 gaurav opened 2 years ago
1
Add description to PyPI page

#132 gaurav closed 2 years ago
1
Add support for storing and emiting Decimals in the CRDC-H instance data

#131 gaurav opened 2 years ago
0
Add support for approximate dates

#130 gaurav opened 2 years ago
0
support forming a URI from Coding values

#129 balhoff opened 2 years ago
2
Implement clean up strategies

#128 sujaypatil96 opened 2 years ago
5
Switch from setup.py to poetry for Python Data Class installation

#127 gaurav closed 2 years ago
1
Add JSON Schema validation

#126 gaurav opened 2 years ago
0
make all/test both ok #123

#125 turbomam closed 2 years ago
6
Add example data from the Example Data Workflow to use as tests

#124 gaurav opened 3 years ago
0
missing mkdocs dependency?

#123 balhoff opened 3 years ago
5
Fix PyPI package generation

#122 gaurav closed 2 years ago
5
Update Pipenv to update openpyxl from a deleted version

#121 gaurav closed 3 years ago
1
openpyxl==3.0.8 is not available (deleted version)

#120 jooho-lee-kim closed 3 years ago
3