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cancerit
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telomerecat
Telomerecat: The telomere computational analysis tool
GNU General Public License v3.0
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Telomere length not as expected in healthy blood
#47
Urja25
opened
5 months ago
0
Different results with same file as input. Results not reliable.
#46
spnlab
opened
1 year ago
3
Floating point error
#45
jgmayer67
opened
1 year ago
0
telomere length csv
#44
eliu98
closed
1 year ago
0
telbam file failed to generate
#43
eliu98
closed
1 year ago
0
Extremely low read counts and telomere length
#42
sbrt
opened
2 years ago
2
Telomerecat showing error while running
#41
Srij-98
opened
2 years ago
1
Slow process
#40
YiweiNiu
opened
2 years ago
0
Would telomerecat work with single cell DNA sequencing data?
#39
rodrigoduarte88
closed
2 years ago
2
issue run TelomereCat
#38
jpkoc
opened
2 years ago
0
--Reference option for decoding cram not recognized
#37
zlskidmore
opened
2 years ago
3
Change request: add docker run command to docs/readme
#36
chrispyatt
opened
2 years ago
0
Telomere length is zero
#35
kacyng92
closed
2 years ago
7
badge cleanup
#34
keiranmraine
closed
3 years ago
0
Hotfix/4.0.1
#33
keiranmraine
closed
3 years ago
0
Pysam collate error
#32
cwine
closed
3 years ago
3
StopIteration - pysam_collate/bam2telbam etc
#31
keiranmraine
opened
3 years ago
4
telbam.collate_pairs() - not used
#30
keiranmraine
opened
3 years ago
0
setup.py asking for parabam release that doesn't exist
#29
chrispyatt
closed
3 years ago
5
Can't install latests Bug fix release 3.4.1
#28
talshakedhuji
closed
3 years ago
1
Docker container appears to be broken
#27
chrispyatt
closed
3 years ago
1
Telomere length estimation from WXS bam?
#26
tc86
closed
3 years ago
1
Migrate from travis to CircleCI
#25
keiranmraine
closed
3 years ago
1
Feature/clean code
#24
keiranmraine
closed
3 years ago
0
Telomerecat hangs
#23
keiranmraine
closed
3 years ago
3
Error message in bam2telbam
#22
davidroberson
closed
3 years ago
1
Does Telomerecat accepts CRAM file as input instead of BAM file?
#21
Ramanandan
closed
3 years ago
2
Could not retrieve index file
#20
radwaraed
closed
3 years ago
9
Usage Instructions Missing
#19
DarioS
closed
3 years ago
2
Tumour Tissue Sample Estimation and Purity
#18
DarioS
closed
3 years ago
1
Adam develop
#17
adamcweiner
opened
3 years ago
5
unknown error
#16
kikinocka
closed
3 years ago
1
Parabam coming to abrupt halt
#15
dylanzhao1993
closed
3 years ago
1
lots of lines showing "Could not retrieve index file for...."
#14
dylanzhao1993
closed
4 years ago
19
user reported slow process
#13
byb121
closed
3 years ago
13
unexpected error
#12
xtmgah
closed
3 years ago
5
Install cython and make tel_len an int for randint
#11
rpshep
closed
4 years ago
0
no obvious linkage to or from jhrf/telomerecat
#10
mcast
closed
4 years ago
1
Release/3.3.0
#9
byb121
closed
4 years ago
0
move doc from readthedocs.io to this repo
#8
byb121
opened
4 years ago
0
license may need update
#7
byb121
opened
4 years ago
1
all commands exits 0 even with non-exist options
#6
byb121
closed
3 years ago
1
command 'telomerecat' does not have option -v or -h
#5
byb121
closed
3 years ago
1
Feature/explore to py3
#4
byb121
closed
4 years ago
1
Insert option for bam2length
#3
rpshep
closed
3 years ago
4
when only 100 telo reads, results are unstable
#2
byb121
closed
4 years ago
4
temporary folder location
#1
byb121
closed
4 years ago
1