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cggh
/
scikit-allel
A Python package for exploring and analysing genetic variation data
MIT License
281
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49
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Numpy2 compatibility fixes
#416
benjeffery
opened
1 day ago
2
Numpy 2.0 compatibility
#415
hyanwong
opened
1 day ago
0
Scheduled monthly dependency update for July
#414
pyup-bot
opened
1 week ago
0
KeyError: "Unable to open object (unable to open external file, external link file name = 'xxxxxx.h5')"
#413
yifangt-ACRD
opened
4 weeks ago
0
Scheduled monthly dependency update for June
#412
pyup-bot
closed
1 week ago
1
Scheduled monthly dependency update for May
#411
pyup-bot
closed
1 month ago
1
Scheduled monthly dependency update for April
#410
pyup-bot
closed
2 months ago
1
Add Python 3.12 support
#409
alimanfoo
closed
3 months ago
0
Scheduled monthly dependency update for March
#408
pyup-bot
closed
3 months ago
0
Question: Is `allel.stats.hudson_fst()` actually unbiased following Bhatia et al. 2013?
#407
taprs
opened
5 months ago
1
Scheduled monthly dependency update for February
#406
pyup-bot
closed
4 months ago
1
Scheduled monthly dependency update for January
#405
pyup-bot
closed
5 months ago
1
Scheduled monthly dependency update for December
#404
pyup-bot
closed
6 months ago
1
fix build issues due to missing dynamic fields
#403
leshaker
closed
3 months ago
3
Scheduled monthly dependency update for November
#402
pyup-bot
closed
7 months ago
1
Scheduled monthly dependency update for October
#401
pyup-bot
closed
8 months ago
1
Scheduled monthly dependency update for September
#400
pyup-bot
closed
9 months ago
1
Scheduled monthly dependency update for July
#399
pyup-bot
closed
10 months ago
1
Fix #397 by specifying name and dynamic version
#398
leshaker
closed
10 months ago
3
pyproject.yaml `project` must contain ['name'] properties error
#397
risoms
closed
10 months ago
5
Scheduled monthly dependency update for June
#396
pyup-bot
closed
1 year ago
1
Maintenance 2023-05-17
#395
alimanfoo
closed
1 year ago
0
Scheduled monthly dependency update for May
#394
pyup-bot
closed
1 year ago
0
Scheduled monthly dependency update for April
#393
pyup-bot
closed
1 year ago
1
Fu and Li's D and Fay & Wu's H
#392
crisamor
opened
1 year ago
0
Scheduled monthly dependency update for March
#391
pyup-bot
closed
1 year ago
1
Scheduled monthly dependency update for February
#390
pyup-bot
closed
1 year ago
1
Scheduled monthly dependency update for December
#389
pyup-bot
closed
1 year ago
1
Scheduled monthly dependency update for November
#388
pyup-bot
closed
1 year ago
1
reading data chromosome key error
#387
snowformatics
opened
1 year ago
2
Scheduled monthly dependency update for October
#386
pyup-bot
closed
1 year ago
1
Scheduled monthly dependency update for September
#385
pyup-bot
closed
1 year ago
1
Indexing Error for VariantTable, requires values to be monotonically increasing
#384
npb596
opened
1 year ago
0
Scheduled monthly dependency update for July
#383
pyup-bot
closed
1 year ago
1
Bump numpy from 1.21.2 to 1.22.0
#382
dependabot[bot]
closed
3 months ago
1
Scheduled monthly dependency update for June
#381
pyup-bot
closed
2 years ago
1
Scheduled monthly dependency update for May
#380
pyup-bot
closed
2 years ago
1
Behaviour of count_alleles() when all genotypes are missing
#379
alimanfoo
opened
2 years ago
0
Scheduled monthly dependency update for April
#378
pyup-bot
closed
2 years ago
1
Copying GenotypeDaskArray returns DaskArray
#377
travc
opened
2 years ago
0
allel.read_vcf RuntimeError: VCF file is missing mandatory header line ("#CHROM...")
#376
nathanvranken
opened
2 years ago
3
Bump ipython from 7.28.0 to 7.31.1
#375
dependabot[bot]
closed
3 months ago
1
Feature Request - unphased IHS/XPEHH
#374
kullrich
opened
2 years ago
1
Scheduled monthly dependency update for January
#373
pyup-bot
closed
2 years ago
1
error results from allel.pbs
#372
sandyplus
opened
2 years ago
0
Scheduled monthly dependency update for December
#371
pyup-bot
closed
2 years ago
1
allel.pairwise_distance treats missing calls as litteral -1
#370
feilchenfeldt
closed
2 years ago
7
Scheduled monthly dependency update for October
#369
pyup-bot
closed
2 years ago
0
Scheduled monthly dependency update for September
#368
pyup-bot
closed
2 years ago
0
Haplotype data
#367
pengyan19
opened
2 years ago
0
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