issues
search
cytoscape
/
RCy3
New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
MIT License
48
stars
20
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
parameters are wrong in getSelectedNodes/Edges in multiple Filter functions
#73
AlexanderPico
closed
4 years ago
0
remove factors in df for createNetworkFromDataFrames
#72
AlexanderPico
closed
4 years ago
0
add arg to getSelectedNodes/Edges to return SUIDs
#71
AlexanderPico
closed
4 years ago
0
openSession does not work with base.url= option ?
#70
kozo2
closed
4 years ago
1
Do we need to add "setDefaultBaseUrl" function to RCy3?
#69
kozo2
closed
3 years ago
19
openSession(file.location = "http://nrnb.org/data/BasicDataVizDemo.cys") does not work
#68
kozo2
closed
4 years ago
1
Add support for creating groups by column-defined node lists
#67
AlexanderPico
closed
4 years ago
0
remove labels of nodes or edges?
#66
yiluheihei
closed
5 years ago
2
test.getLayoutPropertyNames fails
#65
AlexanderPico
closed
5 years ago
0
subscript and superscript cytoscape
#64
eagomezc
closed
5 years ago
4
setNodeColorBypass errors
#63
kkami1115
closed
5 years ago
7
file import functions should consider current working directory
#62
AlexanderPico
closed
5 years ago
0
missing getEdgeInfo
#61
AlexanderPico
closed
5 years ago
0
Layout Parameter Type and Value are incomplete
#60
AlexanderPico
opened
5 years ago
1
How to apply layout with mapping to edge attribute?
#59
twesleyb
closed
5 years ago
4
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
#58
methornton
closed
5 years ago
2
Add support for lists to loadTableData
#57
AlexanderPico
closed
4 years ago
0
Missing edge attributes in networks with multiple edges
#56
SuhasSrinivasan
closed
5 years ago
2
Error with test.filters
#55
ariutta
closed
5 years ago
0
Exporting with non-ASCII filepaths
#54
ariutta
closed
5 years ago
1
Check for visual.prop in mapVisualProperty
#53
AlexanderPico
closed
5 years ago
0
Can't get node table for for WP186
#52
ariutta
closed
5 years ago
3
test for filters
#51
ariutta
closed
5 years ago
3
openSession should consider current wd
#50
AlexanderPico
closed
5 years ago
1
Missing style functions
#49
AlexanderPico
closed
5 years ago
5
Update unhideAll() in StyleBypasses.R pending CyREST update
#48
AlexanderPico
opened
5 years ago
1
add docs for working with phylogenetic trees
#47
AlexanderPico
closed
5 years ago
0
fix for issue #43 where SUID use for source is more descriptive than …network name when creating subnetworks
#46
jooolia
closed
5 years ago
0
setEdgeLineWidthBypass errors
#45
m-grimes
closed
5 years ago
6
Setting base.url for exportNetworkToNDEx
#44
ariutta
closed
5 years ago
1
small bug in hierarchy with createSubnetwork() when multiple networks of same name
#43
jooolia
closed
5 years ago
1
BiocCheck errors and warning
#42
AlexanderPico
closed
5 years ago
0
Edge attributes in multigraphs
#41
jonaszierer
closed
5 years ago
5
Filters don't use network arg
#40
AlexanderPico
closed
5 years ago
0
Save and Export functions should save to working directory by default
#39
AlexanderPico
closed
5 years ago
0
Not able to customize node height and weight for ellipse
#38
Krithika-Bhuvan
closed
5 years ago
3
a bug(?) in .nodeNameToSUID (and consequently setNodePropertyBypass)
#37
vttrifonov
closed
5 years ago
1
selectEdgesConnectingSelectedNodes not working
#36
AlexanderPico
closed
6 years ago
0
Add function to remove duplicate edges
#35
risserlin
closed
6 years ago
3
no function to "Select Nodes connecetd by selected edges"
#34
risserlin
closed
6 years ago
4
Vignette bugs via Brett
#33
AlexanderPico
closed
6 years ago
1
Commits to be released in 2.2.0
#32
AlexanderPico
closed
6 years ago
1
getGroupInfo error returned in RCy3 2.0.5 when group is expanded
#31
m-grimes
closed
6 years ago
0
Feature request: layout property access
#30
m-grimes
closed
6 years ago
2
Cytoscape crashes when group nodes are moved in subnetworks
#29
m-grimes
closed
5 years ago
7
getGroupInfo
#28
AlexanderPico
closed
6 years ago
1
discrete mapping.type not working in setEdgeLineWidthMapping
#27
m-grimes
closed
6 years ago
1
calls missing base.url and crash when base.url <> default
#26
vttrifonov
closed
6 years ago
1
cyREST
#25
m-grimes
closed
6 years ago
8
Argument type unclear for setNodeColorMapping
#24
dotasek
closed
6 years ago
1
Previous
Next