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dms-vep
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LASV_Josiah_GP_DMS
Analysis of DMS data on Lassa virus GP using dms-vep-pipeline-3
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Antibody escape vs functional effects plots to access potential of antibody escape
#15
Caleb-Carr
closed
1 week ago
4
Plot distribution of functional effects stratified by times observed in natural GPC sequences
#14
Caleb-Carr
closed
1 week ago
4
Compare DMS scores for each region as defined in Figure 2C to the natural variability (i.e., effective amino acids) for that region
#13
Caleb-Carr
closed
1 week ago
5
Compare functional scores to functional effects inferred from global epistasis model
#12
Caleb-Carr
closed
1 week ago
6
Correlation between averaged library A and library B functional effects
#11
Caleb-Carr
closed
1 week ago
3
Additional analyses for revisions
#10
Caleb-Carr
closed
3 weeks ago
1
TODO list
#9
Caleb-Carr
closed
3 months ago
1
Jesse notes on repo
#8
jbloom
closed
7 months ago
0
add functional effect shifts analysis
#7
jbloom
closed
9 months ago
0
some discussion notes from Jesse re antibody selections
#6
jbloom
closed
7 months ago
0
perhaps remove some of the poorer selections from functional score averaging
#5
jbloom
closed
8 months ago
2
remove gaps from alphabet when plotting heat maps
#4
jbloom
closed
9 months ago
1
why are most of your mutations unintended?
#3
jbloom
closed
9 months ago
2
what is `neut_standard_2` in your experiments?
#2
jbloom
closed
9 months ago
1
fix README
#1
jbloom
closed
9 months ago
1