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dputhier
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libgtftk
gtftk C Library and program
GNU General Public License v3.0
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get_sequence and chromosome name
#99
dputhier
opened
2 years ago
1
del_attributes returns null or segfault when trying to delete all keys
#98
dputhier
opened
5 years ago
1
pointer being freed was not allocated
#97
dputhier
opened
5 years ago
1
blast_reader.c: L139
#96
dputhier
closed
5 years ago
4
print_bed() and hsearch_r
#95
dputhier
opened
5 years ago
3
del_attr test no more working and passing tests
#94
dputhier
closed
5 years ago
2
Segfault when accessing keys
#93
dputhier
opened
5 years ago
0
get_type
#92
fafa13
opened
5 years ago
0
Feature print bed
#91
dputhier
opened
5 years ago
0
get_sequence
#90
dputhier
closed
5 years ago
9
get_sequence. Problem with rev-comp (critical...). Sequence truncated.
#89
dputhier
closed
5 years ago
7
Add an arg to print to delete 'chr'
#88
dputhier
opened
5 years ago
0
Add an arg to print_gtf to convert (chr)MT to (chr)M...
#87
dputhier
opened
5 years ago
0
Warning during installation under docker image
#86
dputhier
closed
5 years ago
2
Warnings upon compilation
#85
dputhier
closed
5 years ago
2
Various warnings and duplicate symbols
#84
dputhier
closed
6 years ago
6
Some issues encountered using a docker env
#83
dputhier
closed
5 years ago
3
Sorting of gtf is not the same on all systems
#82
dputhier
closed
6 years ago
1
blast2gtf
#81
fafa13
opened
6 years ago
1
select_trancript (select_most_5p_tx) is not returning the most 5' tx
#80
dputhier
closed
5 years ago
21
minor issue in add_exon_number
#79
dputhier
closed
6 years ago
0
Problem with invert_match and select_by_key
#78
dputhier
closed
6 years ago
0
select_transcript() def to be deleted from header
#77
dputhier
closed
6 years ago
1
GTF_DATA is lost when a GTF object is removed from memory
#76
fafa13
closed
6 years ago
0
Problem with empty results
#75
dputhier
closed
6 years ago
0
Issue with libgtftk.get_sequences (this one looks simple)
#74
dputhier
closed
6 years ago
1
Pointer being freed was not allocated
#73
dputhier
closed
6 years ago
7
merge_attr
#72
dputhier
closed
6 years ago
3
Question regarding select_by_key
#71
dputhier
closed
5 years ago
4
size =
#70
dputhier
closed
6 years ago
3
Issue with select_by_positions
#69
dputhier
closed
6 years ago
1
Some warnings upon installation
#68
dputhier
closed
6 years ago
1
Convert_ensembl
#67
dputhier
closed
6 years ago
4
select_transcript(self._data, 1) has became erratic since last push
#66
dputhier
closed
6 years ago
3
convert_ensembl gives erratic results
#65
dputhier
closed
6 years ago
1
select_most_5p_tx_1 bug (call to select_transcript(GTF_DATA *gtf_data, 3)
#64
dputhier
closed
6 years ago
1
Select_by_key segfault with ensembl GTF
#63
dputhier
closed
6 years ago
18
Issue with select_by_key and invert_match=True
#62
dputhier
closed
6 years ago
2
select_by_numeric_value segfault in examples
#61
dputhier
closed
6 years ago
1
get_sequences Segmentation fault
#60
dputhier
closed
6 years ago
0
Delete a print in select_by_loc
#59
dputhier
closed
6 years ago
0
Processing time in add_attr
#58
dputhier
closed
6 years ago
1
convert_ensembl very slow on MAC
#57
dputhier
closed
6 years ago
10
select_by_key output is unstable
#56
dputhier
closed
6 years ago
1
merge_attr.c improvements
#55
dputhier
closed
6 years ago
1
select_by_key segfault with 3.3
#54
dputhier
closed
6 years ago
15
get_feature_list
#53
dputhier
closed
6 years ago
3
extract_data uniq argument
#52
dputhier
closed
6 years ago
2
add_prefix/suffix
#51
dputhier
closed
6 years ago
18
select_by_key and invert_match
#50
dputhier
closed
6 years ago
0
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