faylward viralrecall issues

faylward / viralrecall

Detection of NCLDV signatures in 'omic data

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issues

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Desired results for examples

#31 Microbion opened 1 week ago
0
.vregion.annot.tsv

#30 Changle-cell opened 1 month ago
4
Can not found the path of database, I have already download this database and put it into the viralrecall category

#29 pl19940314 opened 2 months ago
3
stuck at cumsum2 on metagenome

#28 michoug opened 5 months ago
0
YML file

#27 abdealijivaji closed 8 months ago
0
missing the DNA fasta output file

#26 andriangajigan opened 9 months ago
3
Requirements file and Prodigal nucleotide file

#25 abdealijivaji closed 9 months ago
0
Unknown issue

#24 thesamuanels opened 10 months ago
5
Running with "general" db requires vog.annotations.tsv which is absent from hmm/

#23 lukesarre closed 4 months ago
3
Pandas treating booleans as ambiguous

#22 cedricblais opened 1 year ago
2
Project License

#21 banhbio opened 1 year ago
2
HMMs database

#20 sugar-sugar1 opened 1 year ago
1
Facing problem in running Viralrecall

#19 vmevada102 opened 1 year ago
7
Issue running test data

#18 BenLRoss closed 2 years ago
5
.markerout files

#17 sipesk opened 2 years ago
1
Issues with Apple M1 Pro chip?

#16 ABediSilva opened 2 years ago
1
Assigning taxonomy on NCLDVs? The missing link.

#15 JSSaini closed 1 year ago
10
Something wrong about python-----TypeError: concat() got an unexpected keyword argument 'sort'

#14 ZongzhiWu closed 2 years ago
2
How to get the score of entire bin just like the result in your essay

#13 Achuan-2 closed 2 years ago
4
viralrecall.py:400: DeprecationWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version.

#12 Achuan-2 closed 2 years ago
5
Appropriate thresholds for taxonomic annotation of viruses.

#11 MengzhiJ closed 3 years ago
1
Run from any directory

#10 alephreish opened 3 years ago
1
NCLDV taxonomy

#9 fujch7 closed 3 years ago
3
How to be sure at recovering NCLDV sequences

#8 mabusfer closed 3 years ago
2
/usr/bin/env: ‘python\r’: No such file or directory

#7 KrisKieft closed 3 years ago
1
How to detect viruses specific to a host genome (an algae)?

#6 JSSaini closed 3 years ago
1
various output files lacking when running --db general

#5 jolienvanhooff closed 3 years ago
6
download from the Virginia Tech library system is not working

#4 avkermanov closed 3 years ago
2
AttributeError: 'DataFrame' object has no attribute 'ix'

#3 xijianfei closed 3 years ago
4
NCLDV database

#2 slaperriere closed 4 years ago
2
added Dockerfile for reproducibility

#1 rsettlage opened 4 years ago
1