jh041 msatcommander issues

jh041 / msatcommander

Automatically exported from code.google.com/p/msatcommander

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1.0.8 not working on 10.9.5

#38 GoogleCodeExporter opened 8 years ago
0
primer3 in msatcommander not producing any primers

#37 GoogleCodeExporter opened 8 years ago
0
IOError: [Errno 2] No such file or directory:

#36 GoogleCodeExporter opened 8 years ago
1
I'm getting a gtk-critical error

#35 GoogleCodeExporter opened 8 years ago
0
Limit to number of contigs searched?

#34 GoogleCodeExporter opened 8 years ago
1
No stop or cancel button in windows version

#33 GoogleCodeExporter opened 8 years ago
0
Installation - launch

#32 GoogleCodeExporter opened 8 years ago
1
Primer3 2.3.0 (and later) dropped the option PRIMER_PAIR_MAX_HAIRPIN_TH causing msatcommander to fail

#31 GoogleCodeExporter opened 8 years ago
0
MacPro OS 10.6.8 issue?

#30 GoogleCodeExporter opened 8 years ago
0
INPUT PROBLEM: Missing SEQUENCE tag -- error designing primers for repeats

#29 GoogleCodeExporter opened 8 years ago
6
_core_.so not found

#28 GoogleCodeExporter closed 8 years ago
4
input fasta file case sensitivity

#27 GoogleCodeExporter opened 8 years ago
4
Sometimes there are fewer primers in combined primers than there should be.

#26 GoogleCodeExporter closed 8 years ago
1
When not combining primers, sometimes there are duplicates (reported by Jarek Bryk)

#25 GoogleCodeExporter closed 8 years ago
1
crash with test data set on linux

#24 GoogleCodeExporter closed 8 years ago
11
No Primer3-file output on version 1.0.3

#23 GoogleCodeExporter closed 8 years ago
7
MSATCommander won't launch

#22 GoogleCodeExporter closed 8 years ago
2
Amplicon lengths are not correct in tagged primers output

#21 GoogleCodeExporter closed 8 years ago
1
Combining loci returns a foreign key error

#20 GoogleCodeExporter closed 8 years ago
1
Pathnames with special characters cause problems

#19 GoogleCodeExporter closed 8 years ago
1
No primer design owing to "dots" in fasta file

#18 GoogleCodeExporter closed 8 years ago
1
Pathnames containing spaces cause problems

#17 GoogleCodeExporter closed 8 years ago
1
A large sequence input?

#16 GoogleCodeExporter closed 8 years ago
4
MSAT COM jamming consistantly

#15 GoogleCodeExporter closed 8 years ago
5
msatCommander.py Fasta NameError in readInfo function

#14 GoogleCodeExporter closed 8 years ago
4
msatCommander.py SequenceIterator ImportError

#13 GoogleCodeExporter closed 8 years ago
8
Store primers in sqlite3 database

#12 GoogleCodeExporter closed 8 years ago
4
Designed primers contain repeat arrays

#11 GoogleCodeExporter closed 8 years ago
5
Add tagging options to upcoming versions (T. Glenn)

#10 GoogleCodeExporter closed 8 years ago
1
Add Primer Start Bases (N. Crawford)

#9 GoogleCodeExporter closed 8 years ago
1
[deleted issue]

#8 GoogleCodeExporter closed 8 years ago
0
Output Additions - add summary of repeats (T. Glenn)

#7 GoogleCodeExporter closed 8 years ago
3
Output Changes - report summary at EOF (T. Glenn)

#6 GoogleCodeExporter closed 8 years ago
1
Output Changes - report no repeats found (T. Glenn)

#5 GoogleCodeExporter closed 8 years ago
1
Menu option issues

#4 GoogleCodeExporter closed 8 years ago
2
Speed up program

#3 GoogleCodeExporter closed 8 years ago
1
Add fasta formatting option

#2 GoogleCodeExporter closed 8 years ago
2
All (slow!) option

#1 GoogleCodeExporter closed 8 years ago
1