issues
search
jodyphelan
/
TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
GNU General Public License v3.0
102
stars
42
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
ModuleNotFoundError
#326
toyukonara
closed
4 months ago
0
snp_dist freq
#325
jloubser
closed
4 months ago
0
Interim or interim
#324
robertwhbaldwin
closed
2 months ago
1
Analysis fails when using bam files as input
#323
KWollenbergPhylo
opened
5 months ago
1
Collate issue
#322
EtienneNtumba
opened
5 months ago
1
tb_profiler docker version 5.0.1; update_tbdb produces "No such file or directory: 'variables.json'" Error
#320
robertwhbaldwin
opened
5 months ago
2
313 fix create db and load library
#318
ryanjameskennedy
closed
5 months ago
1
lineage - how it works?
#317
alantsangmb
opened
6 months ago
1
fa2spoligotype() got an unexpected keyword argument 'kmer_counter'
#316
juliofdiaz
closed
2 months ago
2
Mutations database update
#315
alantsangmb
closed
2 months ago
4
TBProfiler load_library cannot find newly created tbdb
#313
ryanjameskennedy
opened
7 months ago
4
ModuleNotFoundError: No module named 'pathogenprofiler'
#312
Caitgwill
closed
7 months ago
1
TypeError: Parallel.__init__() got an unexpected keyword argument 'return_as'
#309
ponomarevsy
closed
8 months ago
7
Dev
#308
jodyphelan
closed
8 months ago
0
Exception: Don't know how to handle this mutation
#307
schorlton
closed
1 month ago
2
Lineage calls discrepancy between Napier et al. and TB Profiler?
#306
BenjaminLokk
opened
8 months ago
0
Mamba build of tb-profiler failing
#305
noahaus
closed
8 months ago
9
Using phylogenetic tools in v5.0
#304
jeffreybm
opened
9 months ago
0
lineage fields on tb_profiler uutput?
#302
robertwhbaldwin
opened
9 months ago
1
TB-Profiler update_tbdb error
#301
idolawoye
closed
9 months ago
7
How can I fix about command failed?
#300
NonthakornSkw
closed
9 months ago
3
Bedaquiline resistance sequence
#299
pratibha-kadam
opened
10 months ago
1
remove redundant arguments
#298
jodyphelan
closed
11 months ago
0
Dev
#297
jodyphelan
closed
11 months ago
0
Can tbprofiler be analysis amplicon data
#296
zhiliangfu
closed
9 months ago
2
Fazri
#294
fazrisam
opened
11 months ago
1
Rv0678 and mmpR5 on report file
#292
cimendes
opened
11 months ago
1
error: argument --snp_dist: expected one argument
#290
ryobon-dev
closed
12 months ago
3
potential issue with lineage typing
#289
rderelle
opened
1 year ago
1
ERROR WHILE RUNNING TBPROFILER: Kindly help me solve this error
#288
SandraBabirye
opened
1 year ago
6
My version is 4.3 and when I execute tb-profiler update_tbdb, the following message appears
#287
jzhone
opened
1 year ago
3
issues running tb-profiler 2.3.0
#286
rderelle
closed
1 year ago
4
Can tb-profiler collate include missing positions ?
#284
alantsangmb
closed
1 year ago
1
mutations on WHO list
#283
ryobon-dev
closed
1 year ago
2
Could not read Raw - error
#281
brsaran
closed
1 year ago
2
tb-profiler error report
#280
psj1722
closed
1 year ago
2
Error when running TB-profiler (all input files exist)
#279
mdhfz89
closed
1 year ago
3
File not found when running `tb-profiler update_tbdb --match_ref`
#278
aofarrel
closed
1 year ago
3
Translated md file in french from doc folder
#277
justicengom
closed
1 year ago
0
Docs
#276
jodyphelan
closed
1 year ago
0
Vulnerabilities for cryptography
#275
yujun2017
closed
1 year ago
4
Update README-FR.md
#274
jodyphelan
closed
1 year ago
0
Update
#273
jodyphelan
closed
1 year ago
0
Create README-FR.md
#272
justicengom
closed
1 year ago
1
Dev
#271
jodyphelan
closed
1 year ago
0
Dev
#270
jodyphelan
closed
1 year ago
0
Dev
#269
jodyphelan
closed
1 year ago
0
OSError: [Errno 18] Invalid cross-device link:
#268
yujun2017
opened
1 year ago
5
The online analysis website of TBProfiler software crashed.
#267
chen-1911-175
closed
1 year ago
3
AttributeError: 'Namespace' object has no attribute 'conf'
#265
huihuigogo
opened
1 year ago
3
Previous
Next