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kevinjohncutler
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omnipose
Omnipose: a high-precision solution for morphology-independent cell segmentation
https://omnipose.readthedocs.io
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GPU memory usage
#51
sunyi000
opened
11 months ago
2
Installing omnipose - cellpose conflict
#50
ebornet
closed
11 months ago
1
PyQt6 error when starting GUI
#49
sunyi000
closed
10 months ago
4
Omnipose transfer learning
#48
koopa31
closed
11 months ago
4
Unable to train model
#47
rvanroey
opened
1 year ago
4
Question about parallel computing on GPU
#46
Johnxiaoming
opened
1 year ago
3
If you follow the tutorial for GPU version, it always installs the CPU version.
#45
Johnxiaoming
closed
10 months ago
2
IVP loss with 3d images
#44
benjijamorris
closed
10 months ago
13
omnipose install failed
#43
hj1998xxxx
closed
1 year ago
1
Install GUI deps as an extra
#42
colobas
closed
1 year ago
1
Issues using pretrained models.
#41
georgeoshardo
closed
1 year ago
3
2D training using an omnipose pretrained model
#40
nitsbar
closed
1 year ago
2
Error when starting the GUI
#39
Antovigo
closed
10 months ago
1
Problem using GPU
#38
koopa31
opened
1 year ago
2
omnipose/ncolor issue
#37
nikamarand
closed
1 year ago
2
Plant_cp model web address
#36
jklebes
closed
1 year ago
3
Error when doing 3D segmentation
#35
audreyeternal
closed
1 year ago
3
Cannot find 3D example
#34
audreyeternal
closed
1 year ago
2
Training omnipose with existing cell data fails
#33
michaels10
closed
1 year ago
6
error in example multi_channel_cyto.ipynb
#32
audreyeternal
closed
1 year ago
1
omnipose install bug
#31
derekthirstrup
closed
1 year ago
1
Missing cellpose_omni after installation
#30
michaels10
closed
1 year ago
7
How can I use
#29
wyplogin
closed
1 year ago
1
3D training with ValueError(msg)
#28
mccruz07
opened
1 year ago
7
Unable to evaluate 3D unet in CLI
#27
buswinka
opened
1 year ago
2
Masks vs cells
#26
keara
closed
1 year ago
3
ubuntu18.04-python3.8.5 install omnipose error, why pyqt6 not pyqt5?
#25
xujinzh
closed
1 year ago
4
HTTPError: HTTP Error 500: INTERNAL SERVER ERROR
#24
Mycroft0121
closed
1 year ago
1
Issues training on CLI
#23
carolche
closed
1 year ago
6
main() got an unexpected keyword argument 'omni_CLI'
#22
JunMa11
closed
1 year ago
2
jupyter-notebook of the mask reconstruction
#21
JunMa11
closed
1 year ago
2
fail to train model
#20
carolche
closed
1 year ago
1
command to segment cellpose images based on omnipose
#19
JunMa11
closed
1 year ago
1
Install omnipose without GUI dependencies
#18
ElpadoCan
closed
1 year ago
7
Issue with old pytorch version
#17
lguerard
closed
1 year ago
2
Training fails in Omnipose but works in cellpose
#16
lacan
opened
1 year ago
19
Cannot run `python -m omnipose --help`
#15
lacan
closed
1 year ago
2
GPU support for Mac M1?
#14
alix-pham
opened
1 year ago
22
ncolor not automatically updated when updating omnipose
#13
alix-pham
closed
1 year ago
1
LinAlgError: Singular matrix when training
#12
gatoniel
closed
1 year ago
2
example link in README broken
#11
alix-pham
closed
1 year ago
1
Omnipose installation issue
#10
ved-sharma
closed
1 year ago
1
Fix missing import of cellpose io in example 1 notebook
#9
cnstt
closed
1 year ago
0
Example1 notebook not working
#8
cnstt
closed
1 year ago
4
HTTP Error 500: INTERNAL SERVER ERROR
#7
rdemets
closed
2 years ago
1
Numba needs numpy 1.21
#6
leomaury
closed
1 year ago
1
Over-segmentation
#5
WeheliyeHashi
closed
2 years ago
0
Cellpose 3d omnipose model empty mask
#4
CisnerosFernandez
closed
2 years ago
4
098-117 shape mismatch in testing set
#3
JunMa11
closed
2 years ago
4
Segmentation of C elegans
#2
LRpz
closed
2 years ago
1
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