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mpxv-lineages
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lineage-designation
Official place for proposals and details around monkeypox virus lineage designations
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Proposal for B.1.6 sublineage OPG025:A21T,E34K and others
#41
Vjimenez-vasquez
opened
1 week ago
0
Proposal for B.1.20 sublineage OPG117:S297L #2
#40
ammaraziz
opened
3 months ago
1
Proposal for B.1.20 sublineage OPG188:E12K
#39
ammaraziz
opened
3 months ago
2
B.1 sub-lineage proposal with 53 sequences circulating globally during 2023-2024
#38
mengfeip
closed
4 months ago
3
Designate B.1.21, B.1.22 and C.1.1
#37
corneliusroemer
closed
4 months ago
0
Proposal for a C.1 sublineage, circulating mostly in Europe in 2023-24 [160+ seqs]
#36
corneliusroemer
closed
4 months ago
0
Proposal for a B.1 sublineage, circulating in Germany during 2023 [32 seqs]
#35
corneliusroemer
closed
4 months ago
3
Proposal for a B.1 sublineage, circulating in the US (CA/WA) during 2023 [36 seqs]
#34
corneliusroemer
closed
4 months ago
2
Additional lineage designations August 2023
#33
corneliusroemer
closed
1 year ago
0
Proposal for a B.1.3 sublineage potentially associated with recent outbreaks in East Asia (45 sequences)
#32
c19850727
closed
1 year ago
2
New designations B.1.15/B.1.16/B.1.17
#31
corneliusroemer
closed
1 year ago
2
Proposal for two B.1 sublineages with defining mut: G161797A (Colombia); and G149818A (Germany,Colombia)
#30
ha-ruiz75
closed
1 year ago
1
update lineages summary
#29
rneher
closed
1 year ago
1
Designation of B.1.13, B.1.14, A.2.3, and A.3
#28
corneliusroemer
closed
1 year ago
4
Proposal for a B.1 sublineage with defining mut C159779T (Germany, France, Sweden, Portugal, US)
#27
corneliusroemer
closed
1 year ago
0
Proposal for a sublineage of A, sequenced in Nigeria and UK
#26
corneliusroemer
closed
1 year ago
0
Proposal for an A.2 sublineage sequenced in USA-TX and Portugal
#25
corneliusroemer
closed
1 year ago
0
Proposal for B.1 lineage with G175093A [35 seqs, 33x USA, 1x UK, 1x Germany]
#24
mbosm
closed
1 year ago
2
Designations-2022-09-26
#23
corneliusroemer
closed
1 year ago
1
Proposal for a global B.1 sublineage with C182950T [19 seq]
#22
corneliusroemer
closed
1 year ago
0
Proposal for an A.2 lineage sequenced 2 times: in UK and recently in US-PA
#21
corneliusroemer
closed
1 year ago
0
Proposal for B.1 lineage with C18133T, G67611A, G130231A, G159277A [39 seqs, 38x USA, 1x COL]
#20
corneliusroemer
closed
1 year ago
2
Proposal for B.1 sublineage with C89906T and G94798A [39 seqs, dominant in Colombia, present worldwide]
#19
corneliusroemer
closed
1 year ago
2
Small clarifications based on feedback
#18
emmahodcroft
closed
1 year ago
2
Add lineages A.2.1 and B.1.9
#17
corneliusroemer
closed
1 year ago
2
doc: add lineage designation checklist
#16
corneliusroemer
closed
1 year ago
0
Proposal for a sublineage of A.2 [4 sequences, 1x US, 1x UK, 2x India]
#15
corneliusroemer
closed
1 year ago
0
Proposal for a sublineage of B.1 with G181367A [19 sequences as of 2022-08-31, 18x Portugal, 1x Canada]
#14
corneliusroemer
closed
1 year ago
0
Add Lineages B.1.6 - B.1.8
#13
corneliusroemer
closed
2 years ago
2
Add lineage summary
#12
rneher
closed
2 years ago
0
Proposal for a sublineage of B.1 with G5595A [19 sequences as of 2022-08-19]
#11
corneliusroemer
closed
2 years ago
0
Proposal for a sublineage of B.1 with 25644T [~40 sequences as of 2022-08-19]
#10
corneliusroemer
closed
2 years ago
5
Potential new hmpxv B.1* lineage (including sublineage) identified in Peru
#9
Vjimenez-vasquez
closed
2 years ago
6
Reconcile and update
#8
emmahodcroft
closed
2 years ago
0
Added a few missing characters for spelling/grammatical correctness.
#7
AngieHinrichs
closed
2 years ago
1
EHN: produce md file with lineage summary
#6
rneher
closed
2 years ago
0
ENH: Not auto-update time stamp unless there's a relevant change to lineages (or scripts?)
#5
corneliusroemer
opened
2 years ago
0
Update readme
#4
rneher
closed
2 years ago
0
ENH: Produce alias_key.json file from lineage yamls
#3
corneliusroemer
closed
2 years ago
2
ENH: Produce clades TSV from lineage yams
#2
corneliusroemer
opened
2 years ago
0
feat: add initial lineage yamls
#1
corneliusroemer
closed
2 years ago
1