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nanoporetech
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pinfish
Tools to annotate genomes using long read transcriptomics data
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Make a bin
#28
conchoecia
closed
3 years ago
0
Polish Cluster stops midway
#27
KaushikPanda1
closed
3 years ago
5
Added support for fasta files
#26
tleonardi
closed
4 years ago
1
pinfish_polish fails when run on BAM generated from fasta file
#25
tleonardi
closed
4 years ago
0
the same full length sequences but in different order results different result
#24
pynie1
closed
4 years ago
3
Error racon - exit status 134
#23
guosongjia
closed
4 years ago
2
pinfish - amplicon clustering
#22
anitagh
closed
4 years ago
1
Takes input from stdin if no input is specified
#21
ljyanesm
closed
4 years ago
1
quality assessment of polished data
#20
MartinTes
closed
4 years ago
1
polish result seems quite strange
#19
ljw90607
closed
4 years ago
4
error for polish cluster
#18
MartinTes
closed
4 years ago
10
question on cluster_gff
#17
ljw90607
closed
4 years ago
1
polish_clusters error?
#16
Renxiaoliang
closed
4 years ago
14
Scaffolding using long-read RNA?
#14
andreaswallberg
closed
4 years ago
1
Using medaka with transcriptome data
#15
MartinTes
closed
4 years ago
14
cluster_gff failed to cluster exons
#13
defendant602
closed
4 years ago
0
cluster_gff option
#12
ljw90607
closed
4 years ago
10
Question: minimum_isoform_percent
#11
martynakgajos
closed
4 years ago
4
Racon failed during polish_clusters run
#10
michieitel
closed
4 years ago
8
syntax error in pinfish/polish_clusters/check_deps.go
#9
mariele-lensink
closed
5 years ago
1
error from polish_clusters
#8
yuntwang
closed
5 years ago
4
error from spliced_bam2gff
#7
yuntwang
closed
5 years ago
2
error loading or unzipping Reference Data
#6
AndrewWT
closed
5 years ago
1
errors from polish_clusters
#5
Tiezhengyuan
closed
5 years ago
10
pinfish annotation for prokaryotic genomes fails to collapse reads
#4
felixgrunberger
closed
4 years ago
4
polish_clusters step
#3
callumparr
closed
5 years ago
2
polish_clusters fails with racon error
#2
sdwien
closed
5 years ago
7
cluster_gff not multithreading
#1
noncodo
closed
5 years ago
7