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nat
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
https://natverse.org/nat/
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igraph dfs may signal unreachable nodes with 0
#518
jefferis
opened
5 months ago
1
Compatibility with igraph 2.0.0
#517
krlmlr
opened
7 months ago
20
Create CODE_OF_CONDUCT.md
#516
schlegelp
closed
7 months ago
1
WIP first version of tps speedup
#515
jefferis
opened
9 months ago
1
Feature/write mesh fixes
#514
jefferis
closed
9 months ago
1
plotly wire3d() no longer working after upgrading from nat 1.8.22 to 1.10.4
#513
Jsalas424
closed
11 months ago
2
Fix test of attribute length mismatch for new igraph
#512
jefferis
closed
1 year ago
1
nat::wire3d is plotting polygons when there should only be triangles - not a problem with rgl::wire3d
#511
Jsalas424
opened
1 year ago
0
Can't recreate the example on the reference site of nat: NeuroAnatomy Toolbox for wire frame plots
#510
Jsalas424
closed
1 year ago
3
bug in get_distance_to_soma
#509
dokato
opened
1 year ago
0
Change rgl.* calls to *3d
#508
dmurdoch
closed
1 year ago
5
Switching off patch in codecov
#507
dokato
closed
1 year ago
5
ngraph operations inform when not a neuron is passed as an argument
#506
dokato
closed
1 year ago
3
consider adding a `nid()` function to handle numeric ids
#505
jefferis
opened
1 year ago
0
Fix/matching by col numeric
#504
jefferis
closed
1 year ago
3
fix bug in matching by first column
#503
jefferis
closed
1 year ago
0
[ENH] topoDotprops modified
#502
dokato
opened
1 year ago
2
WIP: added withMeta parameter to nlapply
#501
dokato
opened
2 years ago
2
nlapply to include metadata from data.frame
#500
dokato
opened
2 years ago
0
write.neurons saves matadata by default
#499
dokato
opened
2 years ago
1
[WIP] units
#498
dokato
opened
2 years ago
0
Igraph fix, moe -> neimode
#497
alexanderbates
closed
2 years ago
3
Changed neimode argument to mode
#496
dokato
closed
2 years ago
1
Seglist updated to the latest igraph version
#495
dokato
closed
2 years ago
2
Need to integrate as.seglist test fix in CRAN release
#494
jefferis
closed
2 years ago
6
Minor edit of stitch_neurons edge cases
#493
dokato
closed
2 years ago
3
Making as.seglist compatible with R/igraph 1.3.0
#492
dokato
closed
2 years ago
1
Future igraph will consider the null graph disconnected
#491
szhorvat
closed
2 years ago
1
Undesired output when stitching with an empty neuronlist
#490
dokato
closed
2 years ago
1
subset neuronlist doesn't work with functions
#489
dokato
closed
2 years ago
3
Fix handling of null elements in xyzmatrix.list
#488
jefferis
closed
2 years ago
1
WIP read in metadata
#487
jefferis
opened
2 years ago
1
Support for 3-vector in xyzmatrix.default
#486
jefferis
closed
2 years ago
1
Add xyzmatrix2list xyzmatrix<-.list
#485
jefferis
closed
2 years ago
1
fixes in xyzmatrix.list
#484
jefferis
closed
2 years ago
1
write neurons save metadata by default
#483
dokato
opened
2 years ago
1
WIP: added hxsurf addition
#482
dokato
closed
2 years ago
2
1.8 (not for merge)
#481
jefferis
opened
2 years ago
0
Teach write.neuron(s) to put metadata in SWC header
#480
jefferis
closed
2 years ago
2
Fixes for issues revealed by GitHub Actions check
#479
jefferis
closed
3 years ago
1
Add windows build to github actions
#478
jefferis
opened
3 years ago
2
GitHub actions with codecov
#477
dokato
closed
3 years ago
2
Feature/GitHub actions2
#476
jefferis
closed
3 years ago
0
GitHub actions with coveralls
#475
dokato
closed
3 years ago
11
Feature natcpp
#474
jefferis
closed
2 years ago
2
WIP speedups using natcpp
#473
jefferis
closed
3 years ago
1
Speeding up simplify_neuron
#472
dokato
closed
2 years ago
7
improve performance of simplify_neuron
#471
dokato
closed
2 years ago
4
Support for units in nat
#470
dokato
opened
3 years ago
1
Allow xyzmatrix method to assign by rownames
#469
dokato
opened
3 years ago
1
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