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nextstrain
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conda-base
Conda package build for nextstrain-base
https://anaconda.org/Nextstrain/nextstrain-base
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Exclude snakemake 7.29.0 due to bug
#37
corneliusroemer
closed
1 year ago
4
Add envdir program
#36
tsibley
closed
1 year ago
0
envdir program is missing
#35
tsibley
closed
1 year ago
1
dev: Switch away from the now-deprecated provision-with-micromamba
#34
tsibley
closed
1 year ago
0
dev: Switch to the new setup-micromamba action…
#33
tsibley
closed
1 year ago
1
Download latest main
#32
joverlee521
closed
1 year ago
0
devel/setup: Pin urllib3<2
#31
joverlee521
closed
1 year ago
0
CI release job failing
#30
joverlee521
closed
1 year ago
4
Add .mambarc to speed up index download
#28
corneliusroemer
closed
1 week ago
2
ci: Test pathogen repo CI builds with the final packages
#27
tsibley
closed
1 year ago
6
`./devel/download-latest` pulls the latest package regardless of label
#26
joverlee521
closed
1 year ago
1
Add pango_aliasor
#25
corneliusroemer
closed
1 year ago
0
CI fails for test-macos: `nextstrain-base is uninstallable becausegoogle-auth ==2.17.2 does not exist (perhaps a missing channel).`
#24
corneliusroemer
closed
1 year ago
1
ENH: Include some osx/linux compatibility checks
#23
corneliusroemer
opened
1 year ago
0
devel/setup: install anaconda-client from conda-forge
#22
joverlee521
closed
1 year ago
1
Bump micromamba action to v15
#21
corneliusroemer
closed
1 year ago
0
Pin Python to 3.10 in ./devel/setup
#20
corneliusroemer
closed
1 year ago
4
CI fails
#19
corneliusroemer
closed
1 year ago
0
dev: Set CONDA_SUBDIR during build, unless it's already set
#18
tsibley
closed
1 year ago
0
Squash noisy CI warnings
#17
tsibley
closed
1 year ago
0
dev: Add summary information to CI runs
#16
tsibley
closed
1 year ago
4
Add coreutils to dev packages for macOS compatibility
#15
corneliusroemer
closed
1 year ago
1
Pin iqtree>=2 and remove problematic pangolin/pangolearn
#14
corneliusroemer
closed
1 year ago
3
ENH: As part of `./devel/build` show a diff vs the current live lockfile
#13
corneliusroemer
closed
1 year ago
1
fix: macos compat, use date -u instead of --utc
#12
corneliusroemer
closed
1 year ago
2
`KeyError: ''` when running `CONDA_SUBDIR=osx-64 ./devel/build` on arm mac
#11
corneliusroemer
closed
1 year ago
1
`./devel/build` tries to install osx-arm64 package when run on arm macos
#10
corneliusroemer
closed
1 year ago
4
BUG: `date: illegal option -- -` when running `./devel/build` on macOS
#9
corneliusroemer
closed
1 year ago
0
Add reassurance that ./devel/setup doesn't screw you
#8
corneliusroemer
closed
1 year ago
0
IQtree is locked to v1.6 rather than something modern like v2.2
#7
corneliusroemer
closed
1 year ago
6
ENH: Add lockfile with exact versions of the various packages for inspection somewhere in this repo
#6
corneliusroemer
closed
1 year ago
3
Add NCBI Datasets CLI
#5
joverlee521
closed
1 year ago
1
Add evofr package for forecasting work
#4
tsibley
closed
1 year ago
1
rethinkdb required for seasonal flu builds to work
#3
huddlej
closed
1 year ago
10
Automate new builds/releases after Augur, Auspice, etc. releases
#2
tsibley
opened
1 year ago
3
Initial implementation
#1
tsibley
closed
1 year ago
9
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