opentargets issues issues

opentargets / issues

Issue tracker for Open Targets Platform and Open Targets Genetics Portal

https://platform.opentargets.org https://genetics.opentargets.org

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issues

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Add patent literature input from SureChEMBL

#3635 remo87 opened 1 hour ago
0
New `most severe consequence` column to add to variants in credible set widget

#3634 buniello opened 3 hours ago
1
List of ids for every widget and its column that cant be disabled

#3633 prashantuniyal02 opened 4 hours ago
1
New study page clean-up tasks

#3632 buniello opened 4 hours ago
1
Outdated information in approved (2023) CRISPR treatment Casgevy

#3631 d0choa opened 5 hours ago
0
API does not return `sumStatQCValues`

#3630 d0choa opened 1 day ago
0
Harmonising new fields + icons/visualisations throughout all relevant widgets

#3629 buniello opened 3 days ago
2
Renewed insilico predictors widget

#3628 d0choa opened 3 days ago
0
Feedback variant not available in search results

#3627 d0choa opened 4 days ago
1
Consistently show `qualityControls` in study and credible set pages

#3626 d0choa opened 1 week ago
0
Arbitrary Gold Standards as input to L2G training

#3625 project-defiant opened 1 week ago
0
Variant pages are failing if most severe consequence is not available

#3624 DSuveges closed 3 days ago
1
Create variant description in the variant index

#3623 d0choa closed 3 days ago
4
Removing tag variant with strange ids from LD index

#3622 DSuveges opened 1 week ago
1
Finngen full cohort results (DF12) available

#3621 d0choa opened 1 week ago
0
Merge gentropy gene_index with platform-etl target steps

#3620 d0choa opened 1 week ago
0
eQTL catalog IDs are not URL-safe

#3619 d0choa opened 2 weeks ago
0
New datasource in associations on-the-fly view

#3618 d0choa opened 2 weeks ago
1
Add `betaRatioSignAverage` column to colocalisation widgets

#3617 d0choa opened 2 weeks ago
2
Stop using `strongestLocus2Gene` in FE queries

#3616 d0choa opened 2 weeks ago
2
Change `pics` finemapping method to `PICS`

#3615 d0choa closed 1 week ago
0
Add `OUT_OF_SAMPLE_LD` QC flag to PICS credible sets

#3614 d0choa closed 1 week ago
0
Handle credible sets mapped to chromosomes 23 and 24

#3613 d0choa opened 2 weeks ago
0
Filter L2G predictions by 0.05 in gentropy step

#3612 d0choa closed 1 week ago
0
Stress testing of BE/FE

#3611 d0choa opened 2 weeks ago
9
Improve L2G model selectivity

#3610 ireneisdoomed opened 2 weeks ago
20
Uniprot widget crashing in variant page

#3609 d0choa opened 2 weeks ago
1
Enrich locus to gene prediction dataset with features

#3608 DSuveges opened 2 weeks ago
2
Have fewer partitions in ETL outputs to make indexing faster

#3607 jdhayhurst closed 2 weeks ago
0
Request for Access to Specific Gene Burden Analysis Data

#3606 nickzren opened 3 weeks ago
0
New confidence field for credible set widgets and page

#3605 buniello opened 3 weeks ago
4
new Genetics evidence widget on associations page

#3604 buniello opened 3 weeks ago
6
L2G widget on credible set page

#3603 buniello opened 3 weeks ago
4
Feature matrix issues

#3602 ireneisdoomed closed 2 weeks ago
1
Genetics Variant page review

#3601 prashantuniyal02 opened 3 weeks ago
5
Ingest disease/target evidence build from L2G prediction

#3600 DSuveges closed 3 weeks ago
1
Add genetics ETL step to generate association data

#3599 DSuveges closed 3 weeks ago
0
Epic: ot-ai-api Refactor to Python

#3598 carcruz opened 4 weeks ago
1
UX feedback summary on the Variant Page

#3597 buniello opened 4 weeks ago
0
Improving the current organisation of the target prioritisation view

#3596 buniello opened 1 month ago
0
Add variantId field to pharmacogenomics ETL step

#3595 jdhayhurst closed 2 weeks ago
0
Investigate using standard deviation from susie output instead of univariate standard error

#3594 Daniel-Considine opened 1 month ago
0
Review the way we create credible sets from susie output

#3593 Daniel-Considine closed 1 month ago
1
Replace univariate beta with susie mu for eqtl-catalogue

#3592 Daniel-Considine opened 1 month ago
1
Redundant MeSH mappings in disease index

#3591 ireneisdoomed opened 1 month ago
0
Variants inconsistently resolved in studies API with many credible sets

#3590 jdhayhurst opened 1 month ago
0
Bulk datasets from eQTL Catalogue are classified as single cell

#3589 ireneisdoomed closed 2 weeks ago
0
Add `credibleSetConfidence` feature to L2G

#3588 ireneisdoomed closed 4 weeks ago
0
Normalise distance features

#3587 ireneisdoomed closed 4 weeks ago
0
Study value of VEP neighbourhood features

#3586 ireneisdoomed opened 1 month ago
0