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Issue tracker for Open Targets Platform and Open Targets Genetics Portal
https://platform.opentargets.org https://genetics.opentargets.org
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Frontend related issues on latest genetics
#3580
prashantuniyal02
opened
1 month ago
0
Filter_by_study_type is now obsolete and should be removed
#3579
Tobi1kenobi
opened
1 month ago
0
UI layout and transitions
#3578
carcruz
opened
1 month ago
0
UI Components Refactor
#3577
carcruz
opened
1 month ago
1
Homepage Update
#3576
carcruz
opened
1 month ago
1
Review color pallets
#3575
carcruz
opened
1 month ago
0
Epic: UI refresh (24.12)
#3574
carcruz
opened
1 month ago
0
Adding the total number of credible set for each study in the API
#3573
prashantuniyal02
opened
1 month ago
0
numberColocalisingVariants in coloc should show the number of shared variants between the two loci
#3572
DSuveges
opened
1 month ago
1
Missing patent data in production
#3571
ireneisdoomed
opened
1 month ago
1
Finngen and QTL catalogue credible sets have redundant tags in loci object
#3570
DSuveges
closed
4 weeks ago
8
Load the latest version of the gentropy outputs
#3569
d0choa
opened
1 month ago
8
Sorting out Uniprot literature evidence
#3568
DSuveges
opened
1 month ago
0
Load `24.10_freeze1` version of the gentropy outputs
#3567
d0choa
closed
1 month ago
3
Flagging and filtering CSs with sum of PIPs not in [0.99,1]
#3566
addramir
closed
3 weeks ago
0
Change the calculation of missing values for neighbourhood features
#3565
addramir
opened
1 month ago
0
Create controlled vocabulary for finemapping methods
#3564
d0choa
opened
1 month ago
0
Consider all protein coding genes in the vicinity of a credible set to extract colocalisation neighbourhood features
#3563
ireneisdoomed
closed
1 month ago
1
Feature labels in L2G Feature importance are missing
#3562
ireneisdoomed
closed
3 weeks ago
0
Adding search by study
#3561
addramir
opened
1 month ago
0
Opensearch is not starting when creating a standalone instance
#3560
remo87
opened
1 month ago
0
All GWAS Catalog studies are marked as invalid
#3559
ireneisdoomed
closed
1 month ago
1
Investigating label extraction/grounding for Ehlers-Danlos syndome
#3558
buniello
opened
1 month ago
1
Summary Statistics QC step should return studyIndex
#3557
project-defiant
closed
1 month ago
1
Introducing a star system for credible sets
#3556
DSuveges
closed
1 month ago
5
Staging data expectations Sep 30th
#3555
d0choa
closed
1 month ago
1
Implement variant consequence features from VEP into L2G
#3554
ireneisdoomed
closed
1 month ago
0
Merge sQTL and tuQTL colocalisation features
#3553
ireneisdoomed
closed
1 month ago
0
Only use protein coding genes to extract functional genomics neighbourhood features
#3552
ireneisdoomed
closed
1 month ago
0
`safe_array_union` handles incorrectly <array<struct>> when struct fields are not sorted
#3551
project-defiant
closed
1 month ago
2
Bug in Review Status of ClinVar widget
#3550
prashantuniyal02
closed
1 month ago
1
Biosample index missing cell lines and other ontologies
#3549
Tobi1kenobi
closed
1 month ago
0
Predictors without scores in GnomAD variant index
#3548
DSuveges
closed
1 month ago
0
New LD matrices for FinnGen
#3547
addramir
opened
1 month ago
0
VariantEffectPredictor outputs variant_index with incorrect schema
#3546
project-defiant
closed
1 month ago
1
Schema validation misses nested arrays
#3545
DSuveges
closed
1 month ago
3
once the dataset is generated - @remo87 can help to load it in the genetics instance and expose the API (separate ticket)
#3544
Tobi1kenobi
closed
1 month ago
0
24.12 PPP documentation effort
#3543
buniello
opened
1 month ago
3
POS fails to run create_disk_data_tarballs for elastic search on genetics data
#3542
jdhayhurst
opened
1 month ago
0
Create gentropy doc pages for the quality control flags
#3541
DSuveges
closed
1 month ago
1
Update documentation.
#3540
project-defiant
closed
1 month ago
0
Major decrease in targets in OpenTargets 24.09 EVA evidence
#3539
dhimmel
opened
1 month ago
2
Load Biosample dataset and expose through API
#3538
d0choa
opened
1 month ago
11
PheWas Plot scoping phase
#3537
buniello
opened
1 month ago
6
Convert `StudyLocusId` to `String`
#3535
d0choa
closed
1 month ago
1
Create DAG for top-hit GWAS Catalog
#3534
d0choa
closed
3 weeks ago
3
Single cell eQTL ingestion from eQTLgen
#3533
addramir
opened
2 months ago
0
Pan UKBB GWAS data ingestion
#3532
addramir
opened
2 months ago
1
Application and access to the AllOfUs data
#3531
addramir
opened
2 months ago
1
Change the way how CSs are assigned to loci in SuSiE
#3530
addramir
opened
2 months ago
1
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