parklab HiNT issues - Githubissues

parklab / HiNT

HiC for copy Number variation and Translocation detection

MIT License

36 stars 8 forks source link

issues

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Log2 per bin

#27 IsMM15 opened 5 days ago
0
TypeError: 'numpy.float64' object cannot be interpreted as an integer

#26 stutimishra7 opened 4 months ago
0
Access denied to references files

#25 polyaB closed 5 months ago
0
ValueError: row index exceeds matrix dimensions

#24 walidabualafia opened 10 months ago
1
How to make reference files for other species

#23 xinghua1001 opened 1 year ago
0
tabix.TabixError: Can't open the index file.

#22 Yousuk-Song opened 1 year ago
0
Error running CNV from .hic files with hg38

#21 ksmetz opened 2 years ago
0
Always report ERROR: path to the matrixfile is not valid.

#20 wzhang42 opened 3 years ago
3
Errors in installing HiNT via conda

#19 Kurotakid opened 3 years ago
1
background matrix

#18 distilledchild opened 3 years ago
2
Update README.md

#17 gmnelson closed 3 years ago
0
Hint reference and background files not available anymore.

#16 mblanche opened 3 years ago
3
Fix a typo in the pip install instructions

#15 alif2 closed 3 years ago
1
Deprecated `.ix` Pandas method causes `hint cnv` to fail.

#14 jrhawley opened 3 years ago
1
Is background matrices necessary?

#13 JiaoLaboratory opened 3 years ago
1
MemoryError

#12 ningwei-wei opened 3 years ago
0
mm10 GC file empty

#11 igoronzy closed 4 years ago
0
Can HiNT be used for genomes of other species, like in plants?

#10 clementmo opened 4 years ago
0
error finding Hint module

#9 mtegtmey opened 4 years ago
0
Enzyme used in Hi-C experiment

#8 ckj199591 opened 4 years ago
1
KeyError: 'chrom' using your docker for 'hint tl' with cooler input

#7 cchlanger opened 4 years ago
2
Update extract_nonHiC.pl

#6 dhawalsjain closed 4 years ago
0
HiNT TL with cooler output

#5 snowsite opened 4 years ago
0
Error: Unable to access jarfile None

#4 maojn closed 4 years ago
1
A bug like code injection if prefix name contains underline

#3 omegahh opened 4 years ago
1
hint cnv -f juicer: TypeError: 'int' object is not subscriptable

#2 sidiropoulos opened 4 years ago
2
Bug? IndexError: list index out of range

#1 areyesq89 opened 4 years ago
1