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pepkit
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pipestat
Pipeline results reporting package
https://pep.databio.org/pipestat/
BSD 2-Clause "Simplified" License
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v0.11.0 release
#208
donaldcampbelljr
closed
5 days ago
0
pipeline_name not set correctly
#207
donaldcampbelljr
closed
5 days ago
0
Warning when using PEPhub backend: SettingWithCopyWarning
#206
donaldcampbelljr
opened
1 month ago
0
make samples type array and nest under items #204
#205
donaldcampbelljr
closed
4 weeks ago
0
proposed schema changes
#204
donaldcampbelljr
closed
5 days ago
2
v 0.10.2 point release
#203
donaldcampbelljr
closed
1 month ago
0
Obtain pephub_url from config file
#202
donaldcampbelljr
closed
1 month ago
0
v0.10.1 release
#201
donaldcampbelljr
closed
2 months ago
0
Dev pephub backend changes
#200
donaldcampbelljr
closed
2 months ago
0
Can pipestat use pephub API key if it is set as an environment variable?
#199
donaldcampbelljr
opened
2 months ago
0
v0.10.0 Release
#198
donaldcampbelljr
closed
2 months ago
0
0.9.3 point release
#197
donaldcampbelljr
closed
4 months ago
0
Integrating Pipestat Summarize with PEPHub
#195
donaldcampbelljr
opened
4 months ago
1
v0.9.2 release
#194
donaldcampbelljr
closed
4 months ago
0
add sqlite option if included in config file
#193
donaldcampbelljr
closed
2 months ago
0
Support sqlite for db backend
#192
donaldcampbelljr
closed
2 months ago
0
Add pipestat summarize for PEPhub backend
#191
donaldcampbelljr
closed
3 months ago
2
Pipestat Summarize - stats not reported and objects have inaccurate paths
#190
donaldcampbelljr
closed
2 months ago
0
Schema validation requires `boolean` when reporting result. `bool` does not validate properly.
#189
donaldcampbelljr
closed
2 months ago
0
Extracting model creation code
#188
nsheff
opened
4 months ago
0
Add pephub backend to Pipestat
#187
donaldcampbelljr
closed
2 months ago
2
Add more output schemas to https://schema.databio.org/
#186
donaldcampbelljr
closed
2 months ago
1
update badges
#185
donaldcampbelljr
closed
5 months ago
0
Refactor reports.py
#184
donaldcampbelljr
opened
5 months ago
1
v0.9.1 release
#183
donaldcampbelljr
closed
5 months ago
0
Dev refactor reporting
#182
donaldcampbelljr
closed
5 months ago
0
Dependency check causes pytest failures when running individual tests.
#181
donaldcampbelljr
closed
5 months ago
4
fix #175
#180
donaldcampbelljr
closed
5 months ago
0
v0.9.0 Release
#179
donaldcampbelljr
closed
5 months ago
0
Create History for Filebackend and DB Backend
#178
donaldcampbelljr
closed
5 months ago
3
pipestat should offer the option to include a history of results
#177
donaldcampbelljr
closed
5 months ago
4
Rethink how pipestat returns reported results
#176
donaldcampbelljr
closed
5 months ago
2
Retrieve is not using the pipestatmanager object record_identifier if none is supplied
#175
donaldcampbelljr
closed
5 months ago
1
Should retrieve_one include items such as created and modified time, or only reported results?
#174
donaldcampbelljr
closed
5 months ago
1
Schema validation exception messaging
#173
khoroshevskyi
closed
5 months ago
3
Only show message about specific backend when created.
#172
donaldcampbelljr
closed
5 months ago
0
Error in retrieving one result in `retrieve_one`
#171
khoroshevskyi
closed
5 months ago
2
Check if required fields are checked if they actually required
#170
khoroshevskyi
closed
5 months ago
3
refactor `replace_JSON_refs` function
#169
khoroshevskyi
closed
5 months ago
1
Specify database schema using python objects instead yaml file
#168
khoroshevskyi
opened
7 months ago
1
move codecov to base coverage report
#167
khoroshevskyi
closed
5 months ago
5
Disable sqlmodel warning
#166
khoroshevskyi
opened
7 months ago
4
v0.8.2 release
#165
donaldcampbelljr
closed
7 months ago
1
Allow parameterizing via env vars
#164
nsheff
closed
2 months ago
2
Retrieving embedded values from object results
#163
nsheff
closed
5 months ago
2
Allow remote schemas. Fix #160
#162
nsheff
closed
6 months ago
5
Should force_overwrite default to true?
#161
nsheff
closed
5 months ago
3
Allow schema to be remote
#160
nsheff
closed
5 months ago
1
pipestat retrieval breaks with common prefix
#159
nsheff
closed
7 months ago
7
Pipestat interface suggestions
#158
nsheff
closed
5 months ago
5
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