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phyloref
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jphyloref
MIT License
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Improve testing of false negatives and resolving to multiple nodes
#57
gaurav
opened
5 years ago
0
Replace System.err with SLF4J calls
#56
gaurav
closed
4 years ago
0
Update README with instructions on use
#55
gaurav
closed
4 years ago
0
Moved Phyloref resolution code into PhylorefHelper
#54
gaurav
closed
5 years ago
0
Centralize code for identifying resolved nodes
#53
gaurav
closed
5 years ago
0
Created a ResolveCommand to resolve phylorefs from the command line
#52
gaurav
closed
5 years ago
0
Replace information and error messages written to STDERR with calls to SLF4J
#51
gaurav
closed
4 years ago
0
Publish JPhyloRef to the Maven Central Repository
#50
gaurav
closed
4 years ago
0
Add tests for WebserverCommand
#49
gaurav
opened
5 years ago
0
Remove ReasonerCommand
#48
gaurav
closed
5 years ago
0
Switch to model 2.0 and add support for the Elk reasoner
#47
gaurav
closed
5 years ago
0
Updated phyx.js context URI in test files
#46
gaurav
closed
5 years ago
0
Add support for Model 2.0
#45
gaurav
closed
5 years ago
1
Replaced Phyloref Ontology URIs with version URIs in tests
#44
gaurav
closed
5 years ago
0
Replace method for identifying testable Phyloreferences
#43
gaurav
closed
5 years ago
1
Replace ontology.phyloref.org URLs with version IRIs
#42
gaurav
closed
5 years ago
1
Update README
#41
gaurav
closed
4 years ago
0
Eliminate reporting 'skipped' phyloreferences
#40
gaurav
closed
3 years ago
1
Modifies .travis.yml to cache Maven downloads.
#39
gaurav
closed
5 years ago
0
Add support for Whelk
#38
gaurav
closed
5 years ago
0
Set up hosting JPhyloRef on a server
#37
gaurav
closed
5 years ago
2
Allow TestCommand to read ontologies from STDIN
#36
gaurav
closed
5 years ago
0
Add support for JSON-LD to TestCommand
#35
gaurav
closed
5 years ago
0
Eliminated getReasonerNameAndVersion() crash when a JNI is not linked
#34
gaurav
closed
5 years ago
1
Updated .gitignore to ignore .DS_Store files
#33
gaurav
closed
5 years ago
0
Added Spotless as a code style enforcer
#32
gaurav
closed
5 years ago
1
Add a verbose mode for improved debugging
#31
gaurav
opened
5 years ago
1
Add basic test suite
#30
gaurav
closed
5 years ago
2
Fixed incorrect code merged in #17
#29
gaurav
closed
5 years ago
0
Add support for OASIS XML Catalog files
#28
gaurav
opened
6 years ago
1
Write out reasoner information during TestCommand/WebserverCommand
#27
gaurav
closed
5 years ago
0
Adds support for JSON-LD files with relative URIs
#26
gaurav
closed
5 years ago
6
Updated WebserverCommand to use local ontologies if available
#25
gaurav
closed
6 years ago
1
Phyloref status extraction now works whether start/end dates are interpreted as Annotations or Datatype Properties
#24
gaurav
closed
3 years ago
1
Fixes bug in running JPhyloRef without specifying which reasoner to use
#23
gaurav
closed
6 years ago
0
Fixed bug in the Webserver command that prevented RDFParseExceptions being sent to the client
#22
gaurav
closed
6 years ago
0
Add support for rule-based reasoners
#21
gaurav
closed
6 years ago
4
Add support for FaCT++ as an alternate reasoner
#20
gaurav
closed
6 years ago
0
Added slf4j-simple as a dependency to close #18
#19
gaurav
closed
6 years ago
0
SLJ4F warnings when running JPhyloRef
#18
gaurav
closed
6 years ago
0
Refactored Phyloref status checking code
#17
gaurav
closed
6 years ago
0
Updated Phyloref ontology IRI as per phyloref/phyloref-ontology#21
#16
gaurav
closed
6 years ago
0
JPhyloRef should ignore errors in phyloreferences marked deprecated
#15
gaurav
opened
6 years ago
2
Updated CHANGELOG as should have been carried out in PR #12 and #13
#14
gaurav
closed
6 years ago
0
Removed some Eclipse files that shouldn't be in Git; added to .gitignore
#13
hlapp
closed
6 years ago
1
Added a "webserver" command that provides an HTTP API for reasoning
#12
gaurav
closed
6 years ago
1
Get rid of RDFHandler hack
#11
gaurav
closed
3 years ago
0
Upgrade JFact to 5.0.1
#10
gaurav
closed
6 years ago
1
Phyloreference status support
#9
gaurav
closed
6 years ago
2
Add support for testing phyloreferences with different levels of strictness based on their status
#8
gaurav
closed
6 years ago
2
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