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rprops
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Phenoflow_package
R package offering functionality for the advanced analysis of microbial flow cytometry data
GNU General Public License v2.0
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Installation issue: ERROR: dependency ‘flowFDA’ is not available for package ‘Phenoflow’
#72
vetrabindra01
closed
2 years ago
1
functionality of FCS_pool and assigning a vector to stub
#71
carolina671
closed
2 years ago
2
update to R4.0 on some functions
#70
rprops
closed
3 years ago
0
merge readme changes
#69
rprops
closed
4 years ago
0
sync
#68
rprops
closed
4 years ago
0
Merge pull request #18 from rprops/master
#67
rprops
closed
4 years ago
0
merge
#66
rprops
closed
5 years ago
0
Merge with master changes
#65
rprops
closed
5 years ago
0
RandomF_FCS error
#64
rprops
closed
5 years ago
5
Fixes for latest flowAI update
#63
FMKerckhof
closed
5 years ago
0
ggCyto: ggplot-style plotting for FCM data?
#62
prubbens
opened
6 years ago
1
Merge in importFrom statements
#61
FMKerckhof
closed
6 years ago
0
Several issue fixes related to flowAI
#60
FMKerckhof
closed
6 years ago
0
Update ML branch for removal
#59
FMKerckhof
closed
6 years ago
0
Shouldn't -W be included in the case of FACSVerse data in the build up to filter params for flowAI::autoQC?
#58
FMKerckhof
closed
6 years ago
3
Where does TimeChannel come from in RandomF_precit, line 47?
#57
FMKerckhof
closed
6 years ago
1
A fix for #55
#56
FMKerckhof
closed
6 years ago
0
RandomF_FCS throws warnings when more than 1 dash occurs in the selected params (e.g. PerCP-Cy5.5-A)
#55
FMKerckhof
closed
6 years ago
0
Implement FCS_pool in RandomF_FCS
#54
rprops
opened
6 years ago
2
replace FCS_clean
#53
rprops
closed
6 years ago
0
Fix explicit call of caret::createDataPartition
#52
FMKerckhof
closed
6 years ago
0
Columns in confusion matrix after RandomForest training seem to be swapped around
#51
prubbens
closed
3 years ago
3
Bootstrap fp_contrasts
#50
rprops
opened
6 years ago
1
Allow group_label in RandomF_FCS()
#49
rprops
opened
6 years ago
5
Implement feature importance evaluation
#48
rprops
closed
5 years ago
1
Provide options for dealing with minority classes in RandomForest function
#47
rprops
opened
6 years ago
0
Random forest on time series fcm data
#46
rprops
opened
6 years ago
0
Adjust vignette/tutorial with RandomForest example
#45
rprops
opened
6 years ago
0
Rescaling for bandwidth calculations
#44
FMKerckhof
closed
6 years ago
3
merge master updates into vignettes
#43
FMKerckhof
closed
6 years ago
0
Vignettes
#42
FMKerckhof
closed
6 years ago
1
Error in the wiki: some alpha-diversity components are not calculated
#41
FMKerckhof
closed
6 years ago
2
Justify text in markdown vignette
#40
FMKerckhof
closed
3 years ago
0
Merge flowAI depends
#39
FMKerckhof
closed
6 years ago
0
Reduce memory footprint of diversity_rf
#38
FMKerckhof
closed
3 years ago
1
Server side reproducibility of diversity_rf?
#37
FMKerckhof
closed
5 years ago
4
Make the package pass CRAN checks
#36
FMKerckhof
closed
3 years ago
2
Machine learning
#35
FMKerckhof
closed
6 years ago
0
add unit tests
#34
FMKerckhof
closed
3 years ago
0
Some minor code cleanup
#33
FMKerckhof
closed
6 years ago
2
Add flowAI to imports?
#32
FMKerckhof
closed
6 years ago
1
Implement Random forrest in R
#31
FMKerckhof
closed
6 years ago
5
Add fcs to csv export of flowdata_transformed_all for downstream machine learning
#30
FMKerckhof
closed
6 years ago
2
add flowclean for QC in default pipeline (on wiki?)
#29
FMKerckhof
closed
7 years ago
6
Clean install on win10, R 3.3.3 does not work ==> dependency settings?
#28
FMKerckhof
closed
6 years ago
9
Leinster & Cobbold implementation
#27
FMKerckhof
closed
6 years ago
8
Parallelize Diversity_16S
#26
FMKerckhof
closed
7 years ago
9
In silico community function
#25
rprops
closed
6 years ago
2
Include function for absolute quantification of OTUs
#24
rprops
closed
5 years ago
2
pull to update my fork
#23
FMKerckhof
closed
7 years ago
2
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