rvaser spoa issues - Githubissues

rvaser / spoa

SIMD partial order alignment tool/library

MIT License

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issues

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Parallelization

#74 mesti90 opened 6 months ago
0
spoa::Graph::GenerateConsensus additional overload

#73 tbrekalo closed 11 months ago
3
Fix meson subproject loading

#72 rvaser closed 11 months ago
0
Illegal Instruction

#71 heliziii closed 6 months ago
2
Update to C++17 plus a new meson option

#70 rvaser closed 1 year ago
0
Warning/build fixes

#69 rvaser closed 1 year ago
0
Add meson support

#68 rvaser closed 1 year ago
0
Please set policy CMP0074 to NEW

#67 jguhlin opened 1 year ago
1
make: *** No targets specified and no makefile found. Stop.

#66 kcjavier21 closed 1 year ago
1
adding the library

#65 asylvz opened 1 year ago
0
'Cleverly' align sets of redundant sequences

#64 AndreaGuarracino closed 1 year ago
2
Unexpected alignment results

#63 paoloshasta closed 1 year ago
6
Num modified

#62 nlopez98 opened 2 years ago
1
How to prevent gaps at the ends of the alignment?

#61 Robin-Rounthwaite closed 2 years ago
2
Can this be used on nanopure data?

#60 raw937 opened 2 years ago
1
Unoptimal consensus

#59 Dmitry-Antipov closed 3 years ago
2
spoa: make errors

#58 xinxin416 opened 3 years ago
1
Fails with the latest cereal: ld: error: unable to find library -lcereal

#57 yurivict opened 3 years ago
2
4.0.5 build -DBUILD_SHARED_LIBS=ON : CMakeFiles/spoa.dir/build.make:144: *** missing separator. Stop.

#56 mr-c closed 3 years ago
9
upgrade to SIMDe v0.7.0

#55 mr-c closed 3 years ago
1
Build fails on ppc64le

#54 gururajrkatti closed 3 years ago
6
Inconsistent output directory of libspoa.a

#53 rlorigro closed 3 years ago
3
Install error: ‘Alignment’ has not been declared

#52 shaohaojing closed 3 years ago
3
How to get both GFA and MSA as output?

#51 AndreaGuarracino closed 3 years ago
5
Issue when installing spoa

#50 stanislasmorand closed 4 years ago
3
Spoa v4.0.0 doesn't work when input is FASTA

#49 wwliao closed 4 years ago
2
Add cereal include

#48 cjw85 closed 4 years ago
4
Linking spoa as an ExternalProject in CMake

#47 rlorigro closed 4 years ago
2
Using quality values from FastQ to generate consensus/graph

#46 ms-gx closed 4 years ago
2
write GFA paths in reverse when alignment is reversed

#45 ekg closed 4 years ago
6
Expose parts of the graph

#44 ekg closed 4 years ago
3
Expose alignment score

#43 ekg closed 4 years ago
1
optionally build the graph using reverse complemented alignments

#42 ekg closed 4 years ago
4
Illegal instruction

#41 paoloczi closed 4 years ago
2
make error

#40 zhenzhenyang-psu closed 4 years ago
3
determining alignment score

#39 ekg closed 3 years ago
5
Fix compiler error while generating shared library.

#38 bagashe closed 4 years ago
0
Fix compiler error while generating shared library.

#37 bagashe closed 4 years ago
2
write GFAv1 of POA graph

#36 ekg closed 4 years ago
7
Unable to build shared library for v3.3.0 on Ubuntu 20.04 LTS with gcc v9.3.0

#35 bagashe closed 4 years ago
26
[bioparser::FastqParser] error: invalid file format!

#34 ksahlin closed 4 years ago
2
CPU dispatcher to different SIMD architectures

#33 mbrcic closed 4 years ago
0
Output graph as GFA

#32 rvaser closed 4 years ago
2
Try POA vs POA alignment

#31 rvaser opened 4 years ago
3
Output MSA as FASTA

#30 rvaser closed 4 years ago
3
Introduced SIMDe for portable SIMD

#29 mbrcic closed 4 years ago
0
src/alignment_engine.cpp: support gcc-10

#28 emollier closed 4 years ago
6
Fix getopt handling on architectures where char is unsigned

#27 AdrianBunk closed 4 years ago
0
Conda installation not working

#26 MaestSi closed 4 years ago
18
Added serialisation support using cereal

#25 bsipos closed 4 years ago
4