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serratus-bio
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open-virome
monorepo for data explorer UI and APIs
http://openvirome.com/
GNU Affero General Public License v3.0
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Update URL in app to point to issue selection page, fix yml bug
#97
lukepereira
closed
3 hours ago
0
Add initial issue and PR templates
#96
lukepereira
closed
3 hours ago
0
[Meta] Create Issue Templates
#95
ababaian
opened
1 day ago
7
[map] prune regions of high point density
#94
almosnow
opened
1 day ago
2
BioProject descriptions are missing
#93
almosnow
opened
1 day ago
0
AWS lambda function errors coming from the DB are not evident
#92
almosnow
opened
2 days ago
7
API change on logan_AWS_RDS_proxy function to account for errors
#91
almosnow
opened
2 days ago
1
bug: 500 error on dcoian99debdl.cloudfront.net
#90
almosnow
opened
2 days ago
0
[Feature] Add ElasticSearch for arbitrary text search of meta-data/abstracts
#89
almosnow
opened
2 days ago
2
(not really a bug but a notice) map not working until further notice
#88
almosnow
closed
1 day ago
0
bug: Error parsing JSON response SyntaxError: Unexpected token 'W', "W3siY291bn"... is not valid JSON
#87
almosnow
opened
5 days ago
2
Geocoding on biosample attributes could be improved
#86
almosnow
closed
1 day ago
2
Link openvirome.com/wiki to gh/wiki
#85
ababaian
opened
2 weeks ago
1
Improve error handling on UI
#84
lukepereira
opened
2 weeks ago
1
Use view for all geo queries to only include virus runs
#83
lukepereira
closed
2 weeks ago
0
Gateway error, timeout, `/identifiers` call
#82
almosnow
closed
2 weeks ago
6
Fix minor UI bugs + improve responsive styles on smaller screens
#81
lukepereira
closed
4 weeks ago
0
UI bugs
#80
lukepereira
closed
4 weeks ago
0
Map UI
#79
ababaian
closed
4 weeks ago
0
Decide whether to include runs with palmprints in DB queries
#78
lukepereira
opened
4 weeks ago
1
ViromeSummaryTable: Filter displayed output by Column per Node Type
#77
ababaian
opened
1 month ago
1
Update text summary when clicking on Run/Virus/Edge nodes
#76
ababaian
closed
1 month ago
0
UI Facelift
#75
ababaian
closed
1 month ago
2
Improve filter queries + adjust query limits
#74
lukepereira
closed
1 month ago
0
Use 'include' in filter-related indexes
#73
lukepereira
closed
1 month ago
0
Prevent unncessary network renders/jumps
#72
lukepereira
closed
1 month ago
0
Minor UI fixes
#71
lukepereira
closed
1 month ago
0
Use SQL for filter search query
#70
lukepereira
closed
1 month ago
0
Remove cache, call matieralized views for initial filter counts
#69
lukepereira
closed
1 month ago
0
Set up materialized views for initial filter counts
#68
lukepereira
closed
1 month ago
0
Switch API to logan db
#67
lukepereira
closed
1 month ago
0
Add module help links + report issue link in footer
#66
lukepereira
closed
1 month ago
0
Fix "percent of set" calculation bug on figure
#65
lukepereira
opened
1 month ago
0
Switch Domain from Amplify to `OpenVirome.com`
#64
ababaian
closed
1 month ago
2
Switch logan_AWS_RDS_proxy to Read-only user
#63
lukepereira
closed
1 month ago
2
[Feature] RdRp / sOTU search based on sequence
#62
ababaian
opened
1 month ago
0
Add button for reporting issues
#61
lukepereira
closed
1 month ago
0
[Feature] Add Plot for Date Timeline in Map module
#60
lukepereira
opened
1 month ago
3
Prevent unnecessary network renders, fix initial layout bug
#59
lukepereira
closed
1 month ago
1
sOTU based queries return all sOTU in "match" bioProjects
#58
ababaian
opened
1 month ago
3
postgres upgrade, upgrade extensions and rebuild indexes
#57
almosnow
closed
1 day ago
2
Missing sOTU
#56
ababaian
closed
1 month ago
1
Add onclick summary table to virome network
#55
lukepereira
closed
1 month ago
0
Temp disable reduced identifiers
#54
lukepereira
closed
1 month ago
0
[Feature] Refactor map-ui to display `contigs` (graph edge) not BioSamples
#53
almosnow
opened
1 month ago
3
queryBuilder aggregator improvement
#52
almosnow
closed
1 month ago
3
Improve onboarding for initial app load
#51
lukepereira
opened
1 month ago
1
Module "Help" links
#50
ababaian
closed
1 month ago
0
[Feature] Implement `Simple` and `Advanced` views for each module
#49
ababaian
opened
1 month ago
7
Add metrics to virome module
#48
lukepereira
closed
1 month ago
0
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