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simularium
/
simulariumio
Python package that converts simulation outputs to the format consumed by the Simularium viewer website
Apache License 2.0
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ci(dependabot): bump actions/add-to-project from 0.4.0 to 0.4.1
#139
dependabot[bot]
closed
1 year ago
1
Feature/binary reader leaves binary spatial data
#138
ascibisz
closed
1 year ago
1
ci(dependabot): bump actions/add-to-project from 0.3.0 to 0.4.0
#137
dependabot[bot]
closed
1 year ago
1
Feature/add more UI templates
#136
ascibisz
closed
1 year ago
0
Make agent names case insensitive
#135
ascibisz
closed
1 year ago
3
Use TrajectoryData in converter tests
#134
blairlyons
opened
1 year ago
0
add from_dict to SmoldynData
#133
ascibisz
closed
1 year ago
2
Feature/smoldyn-autoconversion
#132
ascibisz
closed
1 year ago
1
Fix ReaDDy conversion for types missing display data
#131
blairlyons
closed
1 year ago
1
fix/pin-flake8-pyprojecttoml-to-fix-lint
#130
evamaxfield
closed
1 year ago
2
Updates to smoldyn UI template
#129
blairlyons
closed
1 year ago
2
Raise consistent error for problems with input files
#128
blairlyons
closed
1 year ago
1
Option to fit box size
#127
blairlyons
opened
2 years ago
0
Option to center trajectory
#126
blairlyons
closed
1 year ago
1
ci(dependabot): bump actions/add-to-project from 8f59162ff6331da7cfb994cdfdea456d39c0c9bf to 0.3.0
#125
dependabot[bot]
closed
1 year ago
0
Feature/load open binary data
#124
ascibisz
closed
1 year ago
0
Make agent names case insensitive
#123
blairlyons
closed
1 year ago
0
Load open binary data
#122
blairlyons
closed
1 year ago
0
Add missing comma between dependencies
#121
jessicasyu
closed
2 years ago
0
Fix/include jmol colors csv
#120
blairlyons
closed
2 years ago
0
Rewrite Trajectory Converter Tests
#119
ascibisz
closed
1 year ago
1
Progress callback
#118
blairlyons
closed
1 year ago
0
import recipeloader from main package
#117
meganrm
closed
2 years ago
0
Bugfix/validate agent id size
#116
ascibisz
closed
2 years ago
0
Update infrastructure and fix docs
#115
blairlyons
closed
2 years ago
1
admin/update-to-new-cookiecutter
#114
evamaxfield
closed
2 years ago
3
Feature/particle orientations
#113
blairlyons
closed
2 years ago
0
Edge cases for particle orientations
#112
blairlyons
opened
2 years ago
0
Add transform offsets for files in DisplayData
#111
blairlyons
opened
2 years ago
0
Update PhysiCell importer
#110
blairlyons
closed
2 years ago
0
Subpoints relative to agent transform
#109
blairlyons
closed
8 months ago
0
Handle chunked files
#108
blairlyons
opened
2 years ago
0
consistent API naming for frames or timesteps
#107
toloudis
opened
2 years ago
0
Feature/metaballs
#105
blairlyons
closed
2 years ago
4
Initial UI template
#104
blairlyons
closed
2 years ago
1
Metaballs for PhysiCell
#103
blairlyons
opened
2 years ago
0
Feature/Smoldyn templates
#99
blairlyons
closed
2 years ago
5
Rewrite converter tests
#98
meganrm
closed
1 year ago
0
use VIZ_TYPE constant, always multiply radius by scale_factor, use co…
#97
meganrm
closed
2 years ago
0
Metaballs display type
#96
blairlyons
closed
2 years ago
4
Fix failing tests caused by old numpy version
#95
meganrm
closed
2 years ago
0
Fix/v3 updates
#94
blairlyons
closed
2 years ago
0
Feature/cellpack converter
#93
meganrm
closed
2 years ago
1
testing 567
#92
blairlyons
closed
2 years ago
0
testing 456
#91
blairlyons
closed
2 years ago
0
testing 345
#90
blairlyons
closed
2 years ago
0
testing 234
#89
blairlyons
closed
2 years ago
0
testing 123
#88
blairlyons
closed
2 years ago
0
test test test
#87
blairlyons
closed
2 years ago
0
test test
#86
blairlyons
closed
2 years ago
0
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