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PsiCLASS
Simultaneous multi-sample transcript assembler for RNA-seq data
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Requesting information about usage in long-reads
#36
sagnikbanerjee15
opened
2 weeks ago
2
Terminated
#35
edugenetico
opened
2 months ago
0
Error in mikado
#34
edugenetico
closed
2 months ago
0
Stuck in one region
#33
s-kyungyong
opened
6 months ago
1
your latest preprint...
#32
lefterov
opened
9 months ago
3
Experiencing very slow run-time
#31
tcashby
opened
10 months ago
9
v1.0.3 crashing without a note in log
#30
sanyalab
closed
3 months ago
17
Possible risks of including multiple datasets with different library features.
#29
Pentayouth
opened
1 year ago
2
Dockerfile
#28
ens-ftricomi
opened
2 years ago
1
Conda install does not work
#27
Shellfishgene
opened
2 years ago
3
Add the option --stranded to handle strand-specific RNA-seq library
#26
mourisl
closed
2 years ago
0
Is XS tag indispensable for strand-specific RNA-seq library?
#25
Pentayouth
opened
2 years ago
17
Getting frequent Segmentation fault errors
#24
sanyalab
closed
1 year ago
12
Core dumped when combine-subexons
#23
xiekunwhy
closed
2 years ago
16
Open: No such file or directory while running psiclass/classes
#22
Atari61
opened
2 years ago
9
Encountering segmentation fault
#21
sagnikbanerjee15
closed
2 years ago
10
Strategy Question for genome annotation
#20
sanyalab
opened
2 years ago
4
Segmenation fault when using add-genename script
#19
cc-prolix
opened
2 years ago
1
Unknown genome name: -1 error
#18
NicolaVitulo
closed
2 years ago
4
Incorrect assemblies generated by PsiCLASS
#17
sagnikbanerjee15
opened
3 years ago
0
An issue with perl multi-threading
#16
sagnikbanerjee15
closed
3 years ago
4
Read quality scores, indels and substitution
#15
sagnikbanerjee15
opened
3 years ago
6
Quality scores, indels and mismatches
#14
sagnikbanerjee15
closed
3 years ago
0
Requesting conda package
#13
sagnikbanerjee15
closed
3 years ago
5
Running into segfault error 11
#12
Akazhiel
opened
3 years ago
19
Interrupted 3' gene end
#11
splicebox
opened
3 years ago
2
Issue with long introns
#10
sagnikbanerjee15
opened
4 years ago
8
How can I know the version of PsiCLASS?
#9
Xiaofei-git
closed
4 years ago
1
PsiCLASS running into an error
#8
sagnikbanerjee15
opened
4 years ago
10
How important is the addXS step?
#7
sagnikbanerjee15
closed
4 years ago
4
PsiCLASS cannot annotate micro-exons
#6
sagnikbanerjee15
opened
4 years ago
3
Mixture of paired-ended and single-ended read aligments
#5
sagnikbanerjee15
closed
4 years ago
41
Transcripts running in different directions having same gene name
#4
sagnikbanerjee15
opened
4 years ago
10
Assembling samples from multiple conditions
#3
sagnikbanerjee15
opened
4 years ago
14
Maximum number of samples
#2
sagnikbanerjee15
closed
4 years ago
2
Requesting help with some issues with PsiCLASS
#1
sagnikbanerjee15
opened
4 years ago
18