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stemangiola
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tidySummarizedExperiment
Brings SummarizedExperiment to the tidyverse
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fix bug i introduced
#96
mikelove
closed
3 months ago
0
use rwrokflow
#95
stemangiola
closed
3 months ago
0
Adding `mutate_features` and `mutate_samples`
#94
mikelove
closed
3 months ago
6
Make clear than `n` isn't used?
#93
mikelove
opened
4 months ago
1
Robustify utility check
#92
stemangiola
opened
4 months ago
0
redundant RowData in resultant tibble object
#91
cparsania
closed
5 months ago
1
Group split
#90
B0ydT
closed
4 months ago
4
Make distinct as efficient as select for 20K+ samples
#89
stemangiola
opened
7 months ago
0
Add news file
#88
william-hutchison
opened
8 months ago
1
Fix unnest with new purrr
#87
stemangiola
closed
4 months ago
0
Improve `plot_ly`
#86
william-hutchison
closed
10 months ago
0
replace imap, which is behaving inconsistently
#85
stemangiola
closed
10 months ago
0
Warning:The assays in your SummarizedExperiment have row names, but they don't agree with the row names of the SummarizedExperiment object itself
#84
artur-sannikov
opened
11 months ago
1
Improve plot_ly
#83
william-hutchison
closed
10 months ago
1
Generalise to 0 dimensions
#82
stemangiola
closed
11 months ago
0
Update documentation
#81
noriakis
closed
12 months ago
8
Fix checks for duplicated dimnames
#80
csoneson
closed
1 year ago
0
`tidySE` deal with missing assay names
#79
stemangiola
opened
1 year ago
0
Bugfix nonmatching dimnames
#78
csoneson
closed
1 year ago
20
Unnest se
#77
stemangiola
closed
1 year ago
0
Tidy operations with `tidySE` when `colData` and `rowData` share column names
#76
stemangiola
opened
1 year ago
5
Implement `group_by` and `with_groups` for `tidySummarizedExperiment`
#75
stemangiola
opened
1 year ago
1
Speedup `nest` and `unnest` for massive dataset in `tidySummarizedExperiment`
#74
stemangiola
opened
1 year ago
0
drop exports
#73
stemangiola
closed
11 months ago
1
drop generics
#72
stemangiola
closed
1 year ago
0
Unnesting with RangedSummarizedExperiment objects
#71
william-hutchison
closed
1 year ago
0
`tidySE` manage `to_tibble` if rownames not match, or are absent
#70
sdgamboa
closed
1 year ago
9
Fix unnesting with RangedSummarizedExperiment objects
#69
william-hutchison
closed
1 year ago
2
unnesting on RangedSummarizedExperiment cols
#68
mikelove
closed
1 year ago
6
Fix mutate assay
#67
stemangiola
closed
1 year ago
0
mutate() shifts order of data
#66
mikelove
closed
1 year ago
12
Fix tidyr
#65
stemangiola
closed
1 year ago
0
unexpected output when using filter function
#64
HenrikEckermann
opened
1 year ago
0
Dev
#63
stemangiola
closed
1 year ago
0
dplyr::arrange function?
#62
antagomir
closed
2 years ago
2
Fix typo
#61
mblue9
closed
2 years ago
0
Fix column header
#60
stemangiola
closed
2 years ago
0
Optimise nest
#59
stemangiola
closed
2 years ago
0
Dev
#58
stemangiola
closed
2 years ago
0
make filter more robust
#57
stemangiola
closed
2 years ago
0
convert delayedArray to Matrix before printing
#56
stemangiola
closed
2 years ago
0
improve efficiency of often-used functions for huge datasets (2k samp…
#55
stemangiola
closed
2 years ago
0
small edits
#54
stemangiola
closed
2 years ago
0
slice using a range doesn't work on ungrouped data
#53
mblue9
opened
2 years ago
0
If only one assay is present and is nameless, the assay column is not printed
#52
stemangiola
opened
2 years ago
2
Few updates and fixes for docs
#51
mblue9
closed
2 years ago
0
Add workaround for git change
#50
mblue9
closed
2 years ago
0
update_action_to_bioc_3.15
#49
mblue9
closed
2 years ago
5
Dev
#48
stemangiola
closed
2 years ago
0
Update to Bioc 3.14 and R 4.1
#47
mblue9
closed
2 years ago
3
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