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sunduanchen
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Scissor
Scissor package
GNU General Public License v3.0
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Query about Scissor package: Splitting Seurat object for analysis
#63
Pigeongeon
opened
2 weeks ago
0
Update Scissor.R with 'data' Layer for Seurat V5
#62
yifanfu01
opened
2 months ago
1
Error in matrix(NA, nrow = nfolds, ncol = numi2) : invalid 'ncol' value (too large or NA)
#61
seasonzhao
opened
2 months ago
1
X and Y variables : Reliability test
#60
AlexisFon
opened
5 months ago
2
Error Accessing 'data' Slot in Seurat Assay Object When Using Scissor Function
#59
lily424
opened
7 months ago
1
Error in reliability.test
#58
Liux0228
opened
8 months ago
1
"Reliability significance test p = NA"
#57
KOBE24DUNK
closed
8 months ago
1
The order of Tag
#56
zhangnan0107
opened
8 months ago
0
Not absolute monotonic anticorrelation between alpha and percentage
#55
JHovelly
opened
11 months ago
0
Scissor installation error
#54
bioinflix
opened
1 year ago
1
Error in normalize.quantiles(dataset0) : vector types do not match in copyVector
#53
jmzvillarreal
opened
1 year ago
3
The length differs between tags and phenotypes. Please check Scissor inputs and selected regression type.
#52
Jinjin89
closed
11 months ago
1
Error: in normalize.quantiles(dataset0): vector types do not match in copyVector
#51
rln0005
opened
1 year ago
4
Can I merge Scissor results after performing them by subset?
#50
ChoiJi-Hye
opened
1 year ago
2
Can I use metacells data to estimate Scissor cells?
#49
JHovelly
opened
1 year ago
1
limma cameraPR
#47
Able-Andy
opened
1 year ago
2
Error: cannot allocate vector of size 24.6 Gb
#46
Nicole528
opened
1 year ago
1
fit0$lambda.min is NULL,causing 0 Scissor cells detected.
#45
JHovelly
closed
1 year ago
1
how to process the RNA-seq data? log10(count+1) or log2(count+1) or TPM or FPKM?
#44
wang99999shang
opened
1 year ago
3
Can Scissor used for multiple subgroup ?
#43
Phoenix12580
closed
1 year ago
2
The percentage of selected cell is: 0.000%
#42
hyjforesight
opened
1 year ago
3
There is a problem in the running data
#41
chenx9
opened
1 year ago
0
cutoff parameter does not limit number of cells chosen
#40
kpruss
opened
1 year ago
0
Error with some gaussian regression phenotypes
#39
kpruss
opened
1 year ago
0
Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102
#38
Shubhra1994
opened
1 year ago
2
how to use Scissor to deal with those scRNA data without bulk data
#37
liusihaha
opened
2 years ago
0
ERROR RUN Scissor
#36
1378989
opened
2 years ago
3
How to determine the best percentage of Scissor selected cells?
#35
hyjforesight
opened
2 years ago
0
Error in reliability.test
#34
loganylchen
opened
2 years ago
2
0 selected cells
#33
gmcregis
opened
2 years ago
2
log2TPM or TPM?
#32
liumoLM
closed
2 years ago
2
Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102
#31
jxshi
closed
2 years ago
1
Some problem about the input file for scissor with mutation information
#30
YYYYYWWWYYYYYY
closed
2 years ago
3
About normalize bulk and sc data
#29
Ahawywyw
closed
2 years ago
1
Error in asMethod(object) : Cholmod error 'out of memory' at file ../Core/cholmod_memory.c, line 146
#28
snowluckyheart
opened
2 years ago
4
Seurat_preprocessing error
#27
gmcregis
closed
2 years ago
0
Some ideas about use our own seurat object
#26
GuohuaZhu
closed
2 years ago
5
some questions about the function reliability.test()
#25
ZiXuan0606
closed
2 years ago
3
Error for big dataset
#24
xiaoyaohao
opened
2 years ago
9
Shall the alpha value be the same between Scissor() and reliability.test() functions?
#23
hyjforesight
closed
2 years ago
1
Scanpy-proceeded data cannot be run on Scissor
#22
hyjforesight
closed
2 years ago
3
Inconsistent definition of "Net" penalty between Scissor and APML0
#21
HaidYi
closed
2 years ago
3
How to interpret what the worse survival is and what good survival is?
#20
hyjforesight
closed
2 years ago
2
Error in Scissor: There is no common genes between the given single-cell and bulk samples
#19
ShiweiHePH
closed
2 years ago
3
R Session Aborted when running Scissor
#18
Eddylyf
closed
2 years ago
7
Tag for continuous phenotype
#17
xiaoyaohao
closed
2 years ago
1
Run error in our own Seurat object
#16
l-magnificence
opened
2 years ago
8
Error in normalize.quantiles(dataset0) : ERROR; return code from pthread_create() is 22
#15
harrywo-zz
opened
2 years ago
18
Including covariates in coxph regression
#14
grst
closed
2 years ago
1
What the mean of "X","Y", and "network" variables in reliability.test function
#13
Famingzhao
closed
2 years ago
2
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