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vanvalenlab
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deepcell-label
Cloud-based data annotation tools for biological images
https://label.deepcell.org
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Bump max project size 150MB
#535
rossbar
closed
6 months ago
1
Having trouble using Cell-SAM in DeepCell Label
#534
d5423197
opened
8 months ago
1
Add progress load bar when cell sam is segmenting
#533
mimithecoconut
opened
8 months ago
0
Changed channel selection method to add secondary channel to primary channel
#532
mimithecoconut
opened
8 months ago
0
Add instructions for cell SAM panel
#531
mimithecoconut
opened
8 months ago
0
Complete cell-SAM with two channel selection
#530
mimithecoconut
opened
8 months ago
1
CellSAM does not segment 3D organoid images and has limited functionality on the web app
#529
UddeshyaPandey
opened
9 months ago
1
WIP: SAM Selection Integration w/ Frontend
#528
alexanderpg96
opened
9 months ago
0
Cannot upload 16-bit, 4.6GB, 3.55X3.42mm, .tif of 29 channel multiplex image
#527
smith6jt-cop
closed
10 months ago
5
MAINT: Pin werkzeug for flask v2 compatibility.
#526
rossbar
closed
10 months ago
1
DeepCell Label online not responding to request to use example files or user files
#525
Zach-Sten
closed
10 months ago
2
added segment all button and mask rendering
#524
mimithecoconut
closed
8 months ago
3
disabled cells opacity for cell types
#523
mimithecoconut
opened
1 year ago
0
Unable to load images while using DeepCell-label locally
#522
ArozHada
closed
1 year ago
5
New node version incompatible with frontend installation
#521
mimithecoconut
opened
1 year ago
0
Update documentation for set up and testing
#520
ykevu
closed
1 year ago
0
More reqs cleanup
#519
rossbar
closed
1 year ago
0
MAINT: Followup to matplotlib removal.
#518
rossbar
closed
1 year ago
0
MAINT: Rm dependency on matplotlib.
#517
rossbar
closed
1 year ago
0
MAINT: Fix deprecated code and unpin numpy.
#516
rossbar
closed
1 year ago
0
Allow user to specify project names
#515
ykevu
opened
1 year ago
0
Remove cell type selection component when no cell types
#514
ykevu
closed
1 year ago
0
Loading states during calculation for UI
#513
ykevu
opened
1 year ago
0
Auto deploy through Github Actions
#512
ykevu
opened
1 year ago
0
More extensive frontend testing, mainly with Cypress
#511
ykevu
opened
1 year ago
0
Hooking DCL up with the data-registry
#510
ykevu
opened
1 year ago
0
Try to update backend dependencies as far as they can go without breaking
#509
ykevu
opened
1 year ago
0
Improve cell selection and other outline canvas rendering algorithms
#508
ykevu
opened
1 year ago
0
Add small example files for Spots and Cell Types
#507
ykevu
opened
1 year ago
0
Improve prediction UX for active learning
#506
ykevu
opened
1 year ago
0
Add more training metrics / visualization and make confusion matrix have more detail
#505
ykevu
opened
1 year ago
0
Finish implementations of the training distribution bar graph
#504
ykevu
opened
1 year ago
0
Change behavior of how DELETE action works
#503
ykevu
opened
1 year ago
0
Canvas rendering overhaul, greatly improved speed and overlap support…
#502
ykevu
closed
1 year ago
0
Give user ability to adjust cell type outline opacity and control all label opacities simultaneously
#501
ykevu
opened
1 year ago
0
Zarr storage compatability
#500
ykevu
opened
1 year ago
0
More efficient color map handling for cell types
#499
ykevu
opened
1 year ago
0
Cell type and channel name state management fixes
#498
ykevu
closed
1 year ago
0
Bump word-wrap from 1.2.3 to 1.2.4 in /frontend
#497
dependabot[bot]
opened
1 year ago
0
Fix channel name editing
#496
ykevu
closed
1 year ago
1
Add recent project (from IndexedDB) navigation to landing page
#495
ykevu
opened
1 year ago
0
Use something like Scribe for visual DCL tutorials
#494
ykevu
opened
1 year ago
0
Remove all instance of useCellMatrix()
#493
ykevu
closed
1 year ago
1
Handle the console errors that occur when you start a project with no cell types
#492
ykevu
closed
1 year ago
1
Update instructions panel with bug fix and new cell type features
#491
ykevu
closed
1 year ago
0
Update documentation with cellTypes features
#490
ykevu
closed
1 year ago
0
Use marshmallow to validate data inputs for project creation API
#489
ykevu
opened
1 year ago
0
Bump semver from 5.7.1 to 5.7.2 in /frontend
#488
dependabot[bot]
opened
1 year ago
0
Change sizing for modal fit
#487
ykevu
closed
1 year ago
0
Adjusting threshold for nuclear size
#486
megleila
closed
1 year ago
1
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