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virtualcell
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vcell
Virtual Cell Framework
http://vcell.org/
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fix permissions on ssh from docker
#1214
jcschaff
closed
6 months ago
0
VCell deployment on VxRails RKE2
#1213
jcschaff
closed
5 months ago
0
install VCell on VxRails RKE2 Kubernetes cluster
#1212
jcschaff
closed
5 months ago
0
More removal
#1211
CodeByDrescher
closed
6 months ago
0
Random report entries
#1210
CodeByDrescher
closed
6 months ago
0
exported data viewer improvements, PR #1208
#1209
danv61
closed
6 months ago
2
Dan exporter2 UI: exported data viewer improvements
#1208
danv61
closed
6 months ago
0
Geometry Editor and Add Field Data Image Editor Issues in Alpha windows
#1207
ACowan0105
opened
6 months ago
2
QuickFix
#1206
CodeByDrescher
closed
6 months ago
0
Story: Implement external identity providers within VCell
#1205
AvocadoMoon
closed
2 months ago
1
JobID for Dataset Name and Truncated URL
#1204
AvocadoMoon
closed
6 months ago
0
Shorten the N5 file URI and Systematically Name Datasets
#1203
AvocadoMoon
closed
6 months ago
0
Fixed Issue where Geometry did not scale with Unit change to length
#1202
CodeByDrescher
closed
6 months ago
0
Domain mask ij
#1201
AvocadoMoon
closed
6 months ago
0
BioSim Export does not order DataSets correctly according in Spatial Output
#1200
CodeByDrescher
closed
5 months ago
1
Epic: Refactor Export Services in VCell
#1199
CodeByDrescher
opened
6 months ago
0
Hdf5 server fix
#1198
CodeByDrescher
closed
6 months ago
0
Changing compartment size in the Geometry tab of a Stochastic application does not invalidate old sim results
#1197
lesloew
opened
6 months ago
0
export viewer UI candidate
#1196
danv61
closed
6 months ago
2
Dan exporter UI
#1195
danv61
closed
6 months ago
0
1181 vcell export table gui and n5 export gui
#1194
AvocadoMoon
closed
6 months ago
0
Proper Dimensions for Postprocessed Variables
#1193
AvocadoMoon
closed
6 months ago
0
local minikube Kubernetes deployment
#1192
jcschaff
closed
6 months ago
0
deploy functional vcell services to local minikube kubernetes
#1191
jcschaff
closed
6 months ago
0
Uses streams to filter non-overridable constants rather than iterator
#1190
CodeByDrescher
closed
6 months ago
0
Geometry origin and extent not scaled upon unit conversion.
#1189
CodeByDrescher
closed
5 months ago
1
Public Tutorial Examples
#1188
AvocadoMoon
opened
6 months ago
1
NFSim HPC simulation fails with 139 in 7.5.0.112
#1187
jcschaff
closed
2 months ago
0
fix local solver timeout for rule based models
#1186
jcschaff
closed
6 months ago
0
Local sim results sometimes appear with error
#1185
lesloew
opened
6 months ago
3
Local spatial runs do not complete on Alpha 7.5.110
#1184
lesloew
closed
6 months ago
0
Added SubTask tracking to match biosimulators expectations.
#1183
CodeByDrescher
closed
7 months ago
0
local sims fail on m2 mac due to hdf5 native libs
#1182
jcschaff
closed
6 months ago
0
VCell Export Table GUI and N5 Export GUI Ezequiels Revisement
#1181
AvocadoMoon
closed
6 months ago
6
Exporting convoluted variable results exports entire Z stack (the z-stack is based off of mesh)
#1180
AvocadoMoon
closed
6 months ago
0
update test site config and database documentation
#1179
jcschaff
closed
7 months ago
0
fix host for test site deployment
#1178
jcschaff
closed
7 months ago
0
We use the GeometricRegion to recover the correct size of the ROLE_Size parameter
#1177
danv61
closed
7 months ago
2
We use the GeometricRegion to recover the correct size of the ROLE_Size parameter
#1176
danv61
closed
7 months ago
1
Need to write SBML Level 3 ver 1 again so VCell models can be moved easily into COPASI
#1175
ACowan0105
opened
7 months ago
0
Export SBML Level 3 version 1 instead of Level 3 version 2
#1174
jcschaff
opened
7 months ago
0
Export Meta Data Table Not Being Populated
#1173
AvocadoMoon
closed
7 months ago
1
Image Import for Create New Geometry fails
#1172
ACowan0105
opened
7 months ago
1
1164 n5 exporter quick bug fixes
#1171
AvocadoMoon
closed
7 months ago
0
BUG: VCell Alpha v.105 local sims fail on Mac
#1170
lesloew
closed
6 months ago
0
add ssh client to vcell-admin, needed by vcell-su
#1169
jcschaff
closed
6 months ago
0
Better anchor requirements, inconsistent data strict detection
#1168
danv61
closed
7 months ago
2
Better anchor requirements, inconsistent data strict detection
#1167
danv61
closed
7 months ago
0
Install4J client install as regular user
#1166
jcschaff
opened
7 months ago
0
restrict Slurm job actions to user vcell, not just partition
#1165
jcschaff
closed
7 months ago
0
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