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`[
data format: "fastq",
{
name: "Experiment1",
long read files: [
"/PATH/TO/FILE1.fastq",
"/PATH/TO/FILE2.fastq"
],
labels: [
"Sample1",
"Sample2…
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Dear,
I am wondering if megahit can assemble metagenome sequenced with single-end Illumina reads only.
Thank
nic
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Hello, I have a question, is possible polish the primary/alternate and haplo1/haplo2 with illumina reads?
Thanks so much.
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This new term request is for two Illumina sequencers.
A specification sheet from Illumina for both sequencers is available at: https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/mar…
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Given the higher accuracy of illumina short-read SNV/ indel calls compared to ONT long-reads, does longphase support phasing with short-read SNVs and long-read alignments/BAMs?
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cc @turbomam
If we need to represent Illumina NovaSeq 6000 S4, I assume we would create a subclass of
id: OBI:0400043
name: flow cell
def: "Aparatus in the fluidic subsystem where the sheath…
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Hello,
I'm currently working on data preprocessing from multiple Illumina runs.
The first run was sequencend using a v2 kit, while the other runs used v3, which gives me different amplicon sizes (…
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Vedere mail Alfio per il progetto.
In ogni caso il tutto avverrà solo dopo aver deciso se fare o meno le 2 extra DACA per PFL
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Hey,
thanks for the great simulation tool! We simulated reads using this command:
```bash
conda activate SWAMPy
python simulate_metagenome.py \
--genomes_file ../example/viralref.fasta \…