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**Describe the bug**
I was trying to follow the [tutorial](https://liana-py.readthedocs.io/en/latest/notebooks/prior_knowledge.html), but get the error: `AttributeError: module 'liana.resource' has n…
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Hi, apologies for opening an issue for a question.
I am a developer for the uniprot website. We are investigating the incorporation of the data from the https://www.alliancegenome.org/api/gene//ort…
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Dear developers,
Thank you for this great package and for your extensive effort to properly document it!
I have a question regarding the liana_tensor_c2c function/workflow: Is there somehow an i…
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Alpha Fold candidates (BH data not reciprocal)
Usp108 ~P57723. (PCBP4)~ cant be sure, is closer to rnc1
Usp109 P31483 (TIA1/RBM44) candidates
(different predictores give different results, probab…
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bench marking standard
https://github.com/qfo/benchmark-webservice
https://orthology.benchmarkservice.org/proxy/
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### Is there an existing subworkflow for this?
- [X] I have searched for the existing subworkflow
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issu…
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Hi, I wanted to convert a Seurat object built using mouse scRNA data to a new Seurat object with human orthologs. I would like to perform CellphoneDB analysis on the mouse data, but CellPhoneDB requir…
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If I understand HGM (especially Augustus CGP HGM) correctly it returns "orthologs" even for CGPs. So the reference might be missing but the rest of the input genomes might share the annotate gene. Fro…
fbemm updated
6 years ago
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Perhaps we could think about adding sub-heading in this list? It's getting a bit long.
Some ideas for headings:
- Gene lists
- Orthologs/paralogs
- Unstudied/understudied genes
- Other…
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- [x] klp8 (does not seem to be present in S.cerevisiae)
Saccharomyces cerevisiae | KIP1 (YBL063W) | Kinesin-related motor protein more ... | Herrero J et al. (2016)
Saccharomyces cerevisiae |…