-
## Expected Behavior
Test and obtain the expected gene cluster.
## Current Behavior
### using CDS
When I use the gff file generated by prokka, it prompts "Not enough columns in GFF file" `./space…
-
Hi
Congratulations on impressive and hugely useful work - both the ProBound model and MotifCentral database!
I am trying to understand how exactly the relative affinities for new sequences are c…
-
Hi Sagar,
I hope you're doing well. I have a question regarding the calculation of activity in K562, HepG2, and SK-N-SH cell types. If the input file consists of random 200 bp DNA sequences and doe…
-
**Description**
**Sub-lineage of:** KP.3.1.1
**Earliest sequence:** 2024-6-2, Spain – EPI_ISL_19225587
**Most recent sequence:** 2024-8-2, USA, New York – EPI_ISL_19341409
**Continents circulating…
-
Hello!
I'm using modkit for a bacterial (epi)genomics project. I have a large, GC-rich bacterial genome with several methyltransferases which may or may not be expressed under culture conditions. …
-
Hello,
Thank you for developing miRge!
I am trying to analyze canine miRNA using miRge3.0. I was able to successfully create custom canine references using miRge-build and ran our data through the…
-
i am facing this error while running fur, no clue where i did wrong.
# Step Sequences Nucleotides Mutations (N)
# -------------------------------------------------------------…
-
Dear @yinlabniu,
Thank you again for a very important tool to annotate CAZymes and identify CGCs in the microbial genomes of interest.
I am interested in examining how complete are the CGCs in my …
-
Should be simple to add. Together with the other issues that suggests other usearch 7 commands to be implemented, this will make the set of usearch 7 commands for nucleotide sequences complete, as far…
-
@Starnite: all the best for your finals! I'm going to leave here one research questions and one coding challenge that will be useful for this work.
1. Say you're given a set of `n` full-length PB2 …