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recipe | lints
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recipes/2pg_cartesian | ['missing_license']
recipes/advntr | ['should_be_noarch']
recipes/aenum | ['in_other_channels'…
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### Checklist
- [X] I added a descriptive title
- [X] I searched open reports and couldn't find a duplicate
### What happened?
Traceback (most recent call last):
File "/home/xly/soft/mambaforge-…
YDD99 updated
8 months ago
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I get the following error while trying to run using the command (trying to run with no sra, providing fq1 and fq2):
`kgwasflow run -t 11 -c config/config.yaml -n --debug-dag`
```
Building DAG …
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### Description of the bug
This may just be me doing something silly, but the following breaks for me on HPC, sge. Singularity is not staging the bin scritps properly I think. So the `gtf2bed` scri…
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Create a dist for bamdamage.
sapfo updated
10 years ago
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### Description of the bug
I am running the pipeline in Rackham server in UPPMAX, so I am using ```-profile uppmax``` when running the command. I resume a run where I have processed around 200 sample…
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### Description of the bug
The pipeline on my data ran successfully but I'm missing several results folders including edgeR.
Currently I only have the output folders:
```
fastp
genome
index
…
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In my end, v1.4 has been working but v1.5 not work. The error of v1.5 is below:
executor > local (21)
[7f/bfa9f3] process > NFCORE_MYCOSNP:MYCOSNP:INPUT_CHECK:LANE_MERGE (ERR2172267) [100%] 3 of 3…
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### Comment:
I hadn't noticed that I had actually installed xopen 0.7.3 via bioconda in my arm environment - rather than a recent xopen, say 1.7.0 via conda-forge, until I got an error trying to use …
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brew upgrade
Error: Calling Formula.sha1 is disabled!
Use Formula.sha256 instead.
/home/rcmm/.linuxbrew/Library/Taps/chapmanb/homebrew-cbl/bcbio-rnaseq.rb:7:in ' Please report this to the chapmanb/…
yzhzu updated
7 years ago