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Hello
this is a request for improvement, could you add a setting to inject a ssh key for the root user?
I do it manually before "burning" the image to the sd.
thanks!
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Hi, Jared. Any plans to implement support for [GFA](http://lh3.github.io/2014/07/23/first-update-on-gfa/) in SGA? The next release of ABySS will include support for GFA.
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Hi,
Would it be possible to draw self loops in assemblies? This would help us a lot in bacterial assemblies to distinguish coverage limited partial assemblies from plasmids.
For example if I have …
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Hi Ryan,
First of all many I'd like to thanks you for this awesome tool. Now to the issue, while working on a LastGraph to GFA parser, when utilizing Bandage 7.1 to corroborate the specification of …
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@noporpoise proposes in https://github.com/pmelsted/GFA-spec/issues/7#issuecomment-128014521 that the last column of every record is JSON. JSON would replace the current `TAG:TYPE:VALUE` system.
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Dear Jason,
I am using your FALCON de novo assembly algorithm towards BAC clone de novo assembly. The BAC clones have been pooled and have been sequenced with 2 SMRT cells to obtain an effective cove…
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Hi,
I use spades for hybrid assemble with illumina reads and Pacbio Sequel reads. It reports the warnings as below:
```
=== Error correction and assembling warnings:
* 32:42:52.332 107G / 311G…
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It Looks like the Images object causes a problem when printing multiple image labels
I wrote this code and it works smoothly printing both labels
$client = new Client('192.168.4.201');
$zpl = new Bui…
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Would it be straightforward to output the string graph obtained in step 3 of the algorithm in GFA format?
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Hi,
I am using canu on two different PacBio ccs datasets. One is assembled without issues, but the second terminates at Unitiging stage. Both unitiging attempts failed. Removing 4-unitigger/ and re-ru…