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I just had a brief look at the README while explaining what you do. You did not introduce MAGs and I had to look it up:)
It is metagenomic assembeled genome (MAG)?
Hope you are okay:)
enryH updated
2 years ago
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This is neither a feature request nor a bug, although it's closer to the former.
Thank you for developing such a useful tool. If I understood correctly, ReferenceSeeker can be used with MAGs. If so…
padbc updated
2 years ago
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Hi there,
Thank you for the awesome tool. I am analysing my shotgun metagenome dataset and have a couple of questions?
1. As I constructed metagenome assembled genomes from the dataset, do you hav…
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Hello there,
I'm working on creating a database for microbiome data analysis. I started with GTDB release 89 in 2019 to create a in-house pangenome database and other optimization analysis. I used …
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Sorry for this easy question, but I am confused by these two parameters.
The explainations of thses two parameters are `Limit reads used for correction to supporting at most this coverage` and `Lim…
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Hello @rrwick ,
Thanks so much for your work on Polypolish. I am considering using Polypolish on a metagenome dataset for which I have both long (Nanopore) and short read sequencing data. The Polyp…
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Hi,
thanks a lot for Flye! It's been super handy using it in the last two years. I typically assemble metagenomes, i.e. a mix of two genomes - a vertebrate and a parasite, the latter represented in …
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## State of the paper
I'm super happy with updates to the first 3/4s of the results based on feedback from @ctb. Main highlights:
+ introduction to results section/summary of what we did
+ figure…
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### Prerequisites
- [x] make sure you're are using the latest version by `seqkit version`
- [x] read the [usage](http://bioinf.shenwei.me/seqkit/usage/)
### Describe your issue
* [x] describ…
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https://mp.weixin.qq.com/s/TuL0wov4biPS-5nfLVyJ4A
ixxmu updated
2 years ago