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Hi,
I have limited storage capacity and would like to build and index a large number of SRA files. Is it possible to do this iteratively? By this I mean, I would download 10 SRA files, build the in…
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We need to migrate all the assembly and annotation data generated as part of Serratus to our data-lake in a structured way so as to allow for programmatic access. This is a proposed folder hierarchy t…
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失礼します、学生です。DRY解析教本改訂２版で勉強させていただいています。
早速本題に入らせていただきます、P.64の上から4つ目のコマンド「040_run-sra-fastq-dump.sh」なのですが、
$ 040_run-sra-fastq-dump.sh
-bash: 040_run-sra-fastq-dump.sh: command not found
とでてしまい…
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@Marlies1993 was running a distiller with some SRA-s as an input and the pipeline kept crashing at the sra step...
After closer inspection it appears that some of the links of this form: https://gith…
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## CVE-2018-11693 - High Severity Vulnerability
Vulnerable Library - node-sassv4.9.0
:rainbow: Node.js bindings to libsass
Library home page: https://github.com/sass/node-sass.git
Found in HEAD com…
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## CVE-2018-11695 - High Severity Vulnerability
Vulnerable Library - node-sassv4.9.0
:rainbow: Node.js bindings to libsass
Library home page: https://github.com/sass/node-sass.git
Found in HEAD com…
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## CVE-2018-19826 - Medium Severity Vulnerability
Vulnerable Library - node-sassv4.9.0
:rainbow: Node.js bindings to libsass
Library home page: https://github.com/sass/node-sass.git
Found in HEAD c…
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Upon trying to download the test project as provided in the readme, an error occurs claiming that the site cannot be accessed (No such directory ‘sra/sra-instant/reads/ByRun/sra/SRR/SRR013/SRR013549’.…
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Thank you very much for creating HI.SIM. It works very well in most cases, but on one of my data sets, it crashes.
I get a floating point exception when using HImodel on a certain set of human hifi…
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I'd like to use Kingfisher to download some large files but I get charged for I/O. Was wondering if using `--stdout` does the following operation:
* Download SRA
* Pipe SRA to Fastq converter (In…