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Hello,
There are some other issue reports that are similar such as [racon stuck at generating consensus](https://github.com/isovic/racon/issues/64) and [I'm not sure if Racon is stalled or just ta…
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Here is a list of aligners that are made for long reads, add yours and see if we can come up with a unified way to use them?
https://github.com/ocxtal/minialign
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As part of 4-APR meeting.
- Focus on homogenous (sequencing) datasets
- (IN FUTURE) Accommodate hybrid datasets and reflect on the final results (nanopore/illumina)
@vrennie @TimHHH , where exa…
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## New feature
It would be extremely useful if GPU usage metrics were recorded for GPU tasks.
## Usage scenario
Using GPU resources efficiently on HPC is often a challenge. For example, basec…
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Hi,
I have a ~130kb N50 single flow cell out put from a UL ONT chemistry 10
Post inital qc Shasta identifies the following: The run finishes without errors but there is no alignment and the fasta …
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# Issue Report
## Please describe the issue:
Dear Oxford Nanopore team, thank you very much for providing awesome tool and technology.
I'm running dorado v. 0.8.3+98456f7 on a Direct RNA sequ…
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Hi dear DROP team !
We are exploring possibilities to get into aberrant splicing analysis using long read RNA/cDNA sequencing from Nanopore sequencers.
Do you think it is achievable to use the D…
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Hi,
Thank you for developing SPAdes for hybrid assembly.
I tried to assemble Illumina pair-end with Oxford Nanopore Sequence for plant mitochondrial genome assembly.
Before carried out, I used B…
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Hi!
I am running Hifiasm v0.19.5-r593 with Hifi and ultra long oxford nanopore reads. However, after a few days running the process fail (core dump). I performed a selection of onp reads, using onl…
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I am running mitofinder on assembled contigs to search for mtDNA/Genomes. However, I am missing CO1 from the output. I thought maybe I just didn't capture that mtGene. However, to confirm my suspicion…