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![Group 1](https://github.com/user-attachments/assets/4c366d69-8fbb-4a28-a2b8-133932df6487)
Q:
- Switching between Edit / Create
- What happens after a phenotype is added? Do the fields reset? D…
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Thank you very much for the tool, which is very convenient to run. May I know if there are any methods to change the STAR alignment parameters?
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v1.2.0
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution
_No response_
### EPI2M…
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## Description
When a clinical tsv file has ~140 records for Chemotherapy schema, the system shows error message and does not upload the file.
[more information]
## Acceptance criteria
User shoul…
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/stat-reports API 로 20240711 일자 전환보고서 (AD_CONVERSION) tsv 파일을 2024-07-12 일 06시에 정상 다운로드 하여 총 267 raw 를 저장하였고, 이후 보고서 내역이 누락이 있다는 담당자 문의로 금일 2024-07-17일 16시에 /stat-reports API 로 20240711 일자 전환보고서 (AD…
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Hello!
The required layout for those files as explained in the workflow catalog is a bit unclear, having example tables would be much appreciated. After a few failed attempts, I looked at your conf…
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Hi
I am trying to replicate stnet results on the original data. While running python3 -m stnet prepare spatial the code asks for _coords.tsv file which is not present in the datasets.
Do I need …
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While running the scripts from the command line with --job_id, I noticed that each step skips the first set of chromosomes/coordinates in the chrsize.tsv and chrsize_index.tsv. Digging into this, it l…
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Hello,
I've run Centrifuge on my data, and it generated two output files: classification.txt and report.tsv. I then created a kreport.tsv file from the classification.txt file. However, I've notice…
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I am using version 2.4.0 of Arriba and I stumbled across this error:
```
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[2024-08-24T15:53:20] Reading chimeric alignments from '~/bams/sample1_trimmed.star.hg38.Chimeric.bam' (total=138010)
…