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Home > View genome > Add channel
1. Notice that "South America" has a different data-type icon to the others, i.e. a bar-chart rather than a line-graph
Add the channels "South America" and "West Afr…
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HOME [tab] > Explore genomic data through the Viewer [heading] > View genome [button] > ADD CHANNELS [button] > [add channel] > channel config
1. Select "Colour By: Position", and expand/reveal the…
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Discussion and use case
https://help.galaxyproject.org/t/no-link-for-ucsc-to-visualise-datasets/12260/
From UCSC. This would either be in addition to the ucsc.builds.txt
You will also need all ge…
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Under the "Help" drop-down menu, there is a link to our slack page. The link currently redirects users to our WashU Epigenome Browser slack page. Can we create a WashU Virus Genome Browser slack page …
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I was trying to create new indices, but it seems that an error occured.
I used both my own transcript models and those downloaded from the UCSC Genome Browser.
```
You don't seem to have Log::Log4pe…
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Hi all,
It may be a silly question, but how can I visualize my results after obtaining my hal file and convert it to both maf and bigmaf? Is there any special visualization tool? I did not manage t…
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Matthew:
Thanks as always!
I think it useful to have the discussion in the Google group (I find I use it quite a lot). So I will follow up here and submit a bug report.
#####
Version = si…
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@ahwagner when talking about #76 :
> 7:140,485,608, which aligns directly adjacent to ENST00000644969.2_6 / NM_001374258.1 ([browser view](https://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&lastVirtMod…
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bedSort outputs the following for the SNPs dataset from UCSC
```
...
chr22 17586594 17586595 rs34484815 0 +
chr22 17586605 17586605 rs536619616 0 +
chr22 17586604 17586605 rs560126106 0 +
...
…
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we need to figure out what needs to be done to get monarch tracks in the ucsc genome browser
@diekhans promised to help :-)