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thalianol hydroxylase activity
def: Catalysis of the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create thalian-diol((13R,14R,17E)-podioda-8,17,21-trie…
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The current definition for this term defines the product of the reaction based on a review article as:
arabidiol ((3S,13R,14R)-malabarica-17E,21-dien-3beta,14-diol). [source: GOC:cb, PMID:18033581]
…
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Hi,
Just going off the definitions, I was wondering if "glycol metabolic process" should be a child of "polyol metabolic process" since alcohols having 2 hydroxyl groups would be a subset of any poly…
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Create new terms / check existing terms for these metaCyc terms.
Reported by: girlwithglasses
Original Ticket: "geneontology/ontology-requests/3095":https://sourceforge.net/p/geneontology/ontology-r…
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Hi,
For the mapping to UniPathway UPA00852 morphine biosynthesis, please may I have the following new term:
GO:0071272 morphine metabolic process
--<GO:NEW morphine biosynthetic process [defn:The…
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Hello,
I'm submitting these terms for review because their name implies a more generalized reaction yet their definitions (and sometimes "exact" synonyms) are more specific.
1) 20-alpha-hydroxystero…
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Hello,
PMID: 18033581 is my basis for much of this.
"squalene:hopene cyclase activity" as EXACT synonym for GO:0051007.
"oxidosqualene:lanosterol cyclase activity" as EXACT for GO:0000250.
"oxidos…
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UM-BBD has deleted some entries and added others. Adjust GO dbxrefs accordingly.
Obsolete those that have no references or other information beyond the deleted UM-BBD entry:
2-chloro-4,6-dihydroxy-1,…
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This seems to fail:
``` python
import gaff2xml.openeye
import simtk.openmm as mm
from simtk.openmm import app
iupac_name = 'catechol'
molecule = gaff2xml.openeye.iupac_to_oemol(iupac_name)
import op…
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update index page for embrlitmine