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See https://gitlab.com/i5k_Workspace/workspace_roadmap/-/wikis/Adding-an-organism-CWL-update for full description of each task (requires gitlab login)
- assembly accession number: GCF_023898315.1
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See https://gitlab.com/i5k_Workspace/workspace_roadmap/-/wikis/Adding-an-organism-CWL-update for full description of each task (requires gitlab login)
- assembly accession number: GCF_023897955.1
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I'd like to copy the databases generated on our various computers to a webserver, so they could all be viewed with the `cgi` command, but I'm running into this error even when trying to read the datab…
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Hi all! Thanks for putting together such a great tool.
As of the latest update, I'm unable to upload my data. I'm attempting to upload a VCF and its index file. I select the relevant species and g…
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Is there any function that can enable to visualize the paired end links between two pair ends. Just like the broad IGV did, it is quite important to visualize the linkage of pair end sequence to under…
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The collection is `Shitouqi.gnm1.L4VP` while the chromosomes are named `arahy.Shitoqi.gnm1.chr01` etc. That's not allowed, yuck identifiers must match the collection name.
Since https://www.ncbi.nl…
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Hi Marcus,
In megalodon mod_mapping output, is there a easy way to generate BAM **with and without** bisulfite emulative styles at one run?
Or can we start from some intermediate data to generate on…
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These all fail loading for various reasons.
- [x] CIAT22838.gnm1.ann1 - bad IDs
- [x] Daliak.gnm2.ann1 - files missing, that may be on me
- [x] Cameor.gnm1.ann1 - files missing, that may be on me…
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Hi @jrobinso - we've been talking with @arq5x about wanting to add support for [d4](https://github.com/38/d4-format) to IGV. It sounds like there is some prior work and/or discussion on this but I'm …
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I was using "GeMoMa AnnotationFinalizer" in my analysis work, but I met some problems. And could you help me see how to solve it. Following was the log file.
```
$ java -jar /public/software/GeMoMa/…