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#### Are you using the latest version of [samtools](https://github.com/samtools/samtools/releases/latest) and [HTSlib](https://github.com/samtools/htslib/releases/latest)? If not, please specify.
(ru…
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Hello!
I tried to run compare_genomes on several species, got an error
`
Error in file(file, "r") : cannot open the connection
Calls: read.nexus -> scan -> file
In addition: Warning mes…
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http://localhost:8080/api/match/jaccard?id=HP:0007280
```
ontologyUris:
- http://purl.obolibrary.org/obo/hp.owl
ontologyDataUris: []
dataTsvs:
- ./Hs_disease_phenotype.txt
curies:
# …
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From ENA:
At ENA we have also been receiving queries on how to register/declare replicate samples of the types or
Technical replicates: same sample across multiple conditions, e.g. same physical…
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**Description of the report** - every month I need to run a report that gives me a) accessions that have been received that month, b) total number of parts received that month, c) total number of extr…
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Hi @guipenedo , I used your substring dedup script to perform deduplication on a dump of cc and did some manual inspection. I find that some resulting duplicates a bit strange.
For example,
```
…
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The current tRNA (SO:0000253) tree has children for each tRNA isotype plus 'mt_tRNA', but this arrangement has a few problems/deficiencies:
- doesn't clearly distinguish between cytosolic/mitochondri…
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Hello!
First of all, MetaCerberus is a great and very convenient tool to scan through multiple databases for functional annotation! Kudos to you all!
I've been using MetaCerberus to annotate geNo…
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From the file in issue #7 [MorphMap_gene_gene_scoring_data_with_CRISPR.xlsx](https://github.com/broadinstitute/2023_12_JUMP_data_only_vignettes/files/13844874/MorphMap_gene_gene_scoring_data_with_CRI…
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We talked about this already, but I'd like to take action and update the Datastore where appropriate.
There are a number of `gene_models_main` GFFs that have the **Name** attribute starting with _g…