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I have used the aldex plugin for QIIME2 before. However, when I recently tried to access the plug-in, I no longer had it. I opened R in my QIIME2 environment and re-installed. Then, I ran the conda in…
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### Description of feature
Greengenes2 recently came out. Greengenes2 is a new release of the Greengenes database that has been redesigned from the ground up and backed by whole genomes, focusing on …
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A little bit of a weird edge case, but I was working in an environment with only a partial install of Qiime2 (I often do this in cases where I am reading from QZA's but do not need to use any actions …
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Hello @shafferm and @Nicholas_Bokulich,
Thank you so much for developing this package. I successfully installed in qiime2-2020.11 environment and I filtered my features table as you described in th…
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I know this has been a issue previously but it has poped up again on the conda install of version 4.6. Is there a stable version that curently works through conda install?
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Hi,
I am having trouble with running Sequence quality control using DADA2 in `DADA2: 1.26.0 / Rcpp: 1.0.12 / RcppParallel: 5.1.6`
My script is as shown below:
`run_dada.R --input_directory /tmp…
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Hi developer,
I found that the function of script "assign_taxonomy.py" depends on qiime1. But qiime1 is too outdated to install by typing "conda create -n qiime1 python=2.7 qiime matplotlib=1.4.3 m…
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**Bug Description**
Running `qiime feature-table rarefy --p-with-replacement` sometimes generated the error: `sum(pvals[:-1]) > 1.0`
This is likely a float rounding issue.
**Steps to reproduce…
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Seems that the tool version command outputs some extra text:
```
Matplotlib created a temporary config/cache directory at /tmp/matplotlib-kaxxsc2g because the default path (/home/qiime2/matplotli…
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Hi, I'm trying to install genomeinfodbdata-1.2.9 but an error occurs during the installation:
In particualar this is the report:
message:
post-link script failed for package bioconda::bioconducto…