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biocore
/
empress
A fast and scalable phylogenetic tree viewer for microbiome data analysis
BSD 3-Clause "New" or "Revised" License
45
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31
forks
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McHelper QZV links don't load on q2view (expired certificate?)
#560
fedarko
closed
1 year ago
2
Add option to overwrite files when directory exists
#559
gibsramen
opened
2 years ago
0
Option to overwrite existing directory
#558
gibsramen
opened
2 years ago
4
Race condition / itermittent failure in one of the barplot tests
#557
fedarko
opened
2 years ago
0
Support discretization as an alternative to continuous coloring
#556
fedarko
opened
2 years ago
0
Document a few dependencies more clearly in the README, and also work on fixing the build
#555
fedarko
closed
2 years ago
4
Adding midpoint coloring
#554
mortonjt
opened
2 years ago
1
Document dependence on binutils
#553
fedarko
closed
2 years ago
0
Error installing Empress
#552
OliverAshton1
closed
2 years ago
3
Allow settings import/export
#551
jwdebelius
opened
2 years ago
6
Document dependence on Xcode for macOS systems
#550
fedarko
closed
2 years ago
0
Trying to install using the comand in the instructions but get always the same error
#549
cortegas
closed
2 years ago
6
Adding info on feature metadata format in README
#548
Robaina
opened
2 years ago
3
[WIP] Exploring a group of selected nodes by highlighting the path connecting them and providing tools to better compare their metadata.
#547
kwcantrell
opened
2 years ago
8
Add convenience method to empress.js that gets the 0-based index of a feature metadata column
#546
fedarko
opened
2 years ago
0
sorted all menus
#545
kwcantrell
opened
2 years ago
10
Update setup.py PyPI classifiers
#544
fedarko
closed
2 years ago
3
DOC: Small README tidying
#543
fedarko
closed
2 years ago
2
Possible for Empress tree coloring to break when using timed events in Empire plots
#542
fedarko
opened
2 years ago
0
changed control to empress-control
#541
ghost
closed
2 years ago
3
Use a more specific class name than 'control' in Empress' CSS
#540
fedarko
closed
2 years ago
2
Allow explicitly passing data to make-dev-page.py without including feature metadata
#539
fedarko
closed
2 years ago
4
TST: fix spacing (?) in main.yml file re: McHelper
#538
fedarko
closed
2 years ago
3
🐧🚑 add mchelper back to GitHub actions
#537
ElDeveloper
closed
2 years ago
2
REL: bump version to 1.2.0-dev
#536
fedarko
closed
2 years ago
0
Bump version number to v1.2.0 for release; update README screenshots and text
#535
fedarko
closed
2 years ago
0
Continue legend overflow on new line
#534
kwcantrell
opened
2 years ago
1
Don't resize legend when changing non-color-related things?
#533
fedarko
opened
2 years ago
0
Need to un-hide "Update" buttons when enabling sample / feature metadata coloring tabs after finishing an animation
#532
fedarko
opened
2 years ago
0
Error when running with greengenes taxonomy files, integer ID field causes type issue
#531
mstapylton
opened
2 years ago
4
added flag to make-dev-page so that only tree plot is created
#530
kwcantrell
closed
2 years ago
3
set the min, middle, max value of the colorbar
#529
maque4004
opened
3 years ago
2
Length legends' SVG exporting logic doesn't account for long titles
#528
fedarko
opened
3 years ago
0
BUG: Draw node circles as needed in SVG export
#527
fedarko
closed
3 years ago
1
Inconsistent state after barplot errors
#526
fedarko
opened
3 years ago
2
Improves error handling when "shear" but no metadata passed
#525
ChrisKeefe
closed
3 years ago
2
Separate McHelper into a separate GitHub action from the Main CI
#524
fedarko
opened
3 years ago
0
commented out McHelper temporarily
#523
kwcantrell
closed
3 years ago
0
updated the error message for missing features
#522
ericap258
closed
2 years ago
5
[WIP] select min/max of color gradient
#521
kwcantrell
opened
3 years ago
28
Standalone raises incorrect parameter error
#520
ericap258
closed
2 years ago
1
Use toastr to support showing multiple toast messages at once, with a fancy UI
#519
fedarko
closed
3 years ago
4
Center diverging colormaps at 0
#518
jwdebelius
opened
3 years ago
3
McHelper is failing to connect
#517
kwcantrell
closed
2 years ago
4
throttled onwheel event
#516
kwcantrell
closed
3 years ago
4
Fix resizing in main legend when coloring tree by feature metadata gradient with non-numeric warning message
#515
fedarko
opened
3 years ago
0
Small side panel formatting fix: hide button <p> containers instead of buttons; fix prev/next frame animation buttons
#514
fedarko
closed
2 years ago
4
Replace high-level <p> tags with <div>
#513
fedarko
opened
3 years ago
0
Automatically resize main legend when changing tree coloring
#512
fedarko
closed
3 years ago
2
Feature metadata is being dropped
#511
mortonjt
closed
3 years ago
5
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