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Hi,
thanks for this great package! I am trying to use SAFE for the annotation of metadata on a low-dimensional graph representation of microbiome abundance information (similar to: https://genomebi…
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Got this error while running on a large dataset recently using the version from the website (not the github version):
```
Performing gene prioritization
Performing reconstituted gene set enrich…
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Hi all,
I have run a GO enrichment analysis using enrichGO() for all 3 onthologies at once:
```
analysis
Mndin updated
5 years ago
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**Is your feature request related to a problem? Please describe.**
The Network Security Group Flow Logs analysis tool is not very advanced and comfortable. I think it would be very useful to have a f…
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Since the inclusion of OBI:0002144, the lab has posted a publication referencing circulome-seq.
http://www.g3journal.org/content/ggg/early/2017/08/11/g3.117.300141.full.pdf
Do you think it would b…
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These comments pertain to the panther site not GO, but the user ends up here when they do an enrichment so I think it's important to make some clarification from a GO point of view
* http://www.pa…
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Thank you for developing this package! I've used FAN-C (v.0.9.21) to find compartments from 100kb-binned Hi-C data and now want to plot compartment strength as a saddle plot. My code is as follows:
…
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Hi, thanks for a great package! I am working with a brain snRNAseq dataset and have run scDRS to test for the enrichment of MDD, ADHD, ALZ, MS, SCZ, and height GWAS hits (using the MAGMA scores from y…
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Most functions in squidpy seem to be centered around analyzing a single sample.
For me, in the context of clinical trials, it would be important to compare between sample groups. The usual variables…
grst updated
4 months ago
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Error in Functional Enrichment Analysis: Cannot Set New Category on Categorical Variable
#### **Description:**
While running functional enrichment analysis for the "silver" module using `wgcna.f…