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Use case: we need a way to represent
1) cases where only a part of the phenotype definition in known
2) where we want to define a phenotype in terms of another, undefined phenotype which is then e…
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we currently only import the "abnormal" phenotypes, but we also need to bring in the "normal" ones.
we also need to set up a general model for these kinds of statements.
@cmungall please comment on…
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Check phenotype data we extracted from the UKBB, was it self-reported and ICD coding? Consider a sensitivity analysis with only ICD coding phenotypes. We could do three analyses: 1. Self-reported and …
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we need to be able to use the EFO traits/phenotypes.
for example coming from measurements: http://www.ebi.ac.uk/efo/EFO_0004611
or 'abnormality of the cardiovascular system': http://www.ebi.ac.uk/efo…
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Dear professor
Recently, I want to use this package for investigate fitness landscape. But I have puzzle on how to present suitbale data for phenotype.
If I use enzymetical activity as phenotyp…
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Hello,
It has been a while now that I am using this powerful tool which is tensorqtl so thanks for the work. Recently, I'have tried to perform a cis-mapping with an interaction term (which is the s…
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- [ ] Determination of a good similarity score that would allow us to extract the most relevant phenotypes for each disease.
- [ ] Upload the dataset somewhere to become publicly available
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NTR
1) meiosis phenotype
2) altered meiosis (is_a meiosis phenotype)
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Hello,
is it possible to use a qualitative phenotype in variant tools (with my own R test) ?
I tried, but received the following error message :
Invalid (non-numeric) coding in phenotype/covari…
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HS Ticket: 15965137125
Warning: Error in contrasts
zitoa updated
2 weeks ago